Information for 6-TCTCGCAGACCTC (Motif 10)

A G C T A G T C A C G T A G T C A C T G A G T C C T G A A C T G G C T A A G T C A G T C A C G T A T G C
Reverse Opposite:
A T C G C G T A A C T G A C T G C A G T A G T C A G C T A C T G A G T C A C T G C G T A A C T G C T G A
p-value:1e-10
log p-value:-2.479e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.4 +/- 16.2bp
Average Position of motif in Background30.8 +/- 7.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESR1/MA0112.3/Jaspar

Match Rank:1
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TCTCGCAGACCTC
AAGGTCACGGTGACCTG
 A C G T A C G T A C G T A C G T A G C T A G T C A C G T A G T C A C T G A G T C C T G A A C T G G C T A A G T C A G T C A C G T A T G C
C T G A T C G A A C T G C T A G A C G T G A T C C T G A T G A C T A C G T C A G A G C T C T A G T C G A A T G C G T A C A G C T A C T G

HINFP/MA0131.2/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TCTCGCAGACCTC-
--NCGCGGACGTTG
 A G C T A G T C A C G T A G T C A C T G A G T C C T G A A C T G G C T A A G T C A G T C A C G T A T G C A C G T
A C G T A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

ESR2/MA0258.2/Jaspar

Match Rank:3
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TCTCGCAGACCTC
AGGNCANNGTGACCT-
 A C G T A C G T A C G T A G C T A G T C A C G T A G T C A C T G A G T C C T G A A C T G G C T A A G T C A G T C A C G T A T G C
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T A C G T

ZBTB33/MA0527.1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TCTCGCAGACCTC-
CTCTCGCGAGATCTG
 A C G T A G C T A G T C A C G T A G T C A C T G A G T C C T G A A C T G G C T A A G T C A G T C A C G T A T G C A C G T
A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TCTCGCAGACCTC-
----CCAGACRSVB
 A G C T A G T C A C G T A G T C A C T G A G T C C T G A A C T G G C T A A G T C A G T C A C G T A T G C A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0139.1_Irf5_2/Jaspar

Match Rank:6
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TCTCGCAGACCTC
NNAATTCTCGNTNAN---
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C A C G T A G T C A C T G A G T C C T G A A C T G G C T A A G T C A G T C A C G T A T G C
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A A C G T A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:7
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------TCTCGCAGACCTC-
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A C G T A G T C A C T G A G T C C T G A A C T G G C T A A G T C A G T C A C G T A T G C A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

PB0138.1_Irf4_2/Jaspar

Match Rank:8
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----TCTCGCAGACCTC
AGTATTCTCGGTTGC---
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C A C G T A G T C A C T G A G T C C T G A A C T G G C T A A G T C A G T C A C G T A T G C
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:TCTCGCAGACCTC-
------TGACCYCT
 A G C T A G T C A C G T A G T C A C T G A G T C C T G A A C T G G C T A A G T C A G T C A C G T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TCTCGCAGACCTC
GGTCANNGTGACCTN
 A C G T A C G T A G C T A G T C A C G T A G T C A C T G A G T C C T G A A C T G G C T A A G T C A G T C A C G T A T G C
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T