Information for 5-CACTGACACCCGGGGG (Motif 11)

T A G C T G C A T A G C A C G T A C T G C G T A A T G C G C T A A T G C G T A C G T A C C A T G A T C G A T C G T A C G A T C G
Reverse Opposite:
A T G C A T G C T A G C A T G C G T A C A C T G C A T G T A C G C A G T A T C G G A C T A G T C G T C A A T C G A C G T A T C G
p-value:1e-6
log p-value:-1.400e+01
Information Content per bp:1.666
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets43.0 +/- 25.7bp
Average Position of motif in Background70.7 +/- 8.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0101.1_Zic1_1/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CACTGACACCCGGGGG--
----CACCCCCGGGGGGG
 T A G C T G C A T A G C A C G T A C T G C G T A A T G C G C T A A T G C G T A C G T A C C A T G A T C G A T C G T A C G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

PB0103.1_Zic3_1/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CACTGACACCCGGGGG---
----CCCCCCCGGGGGGGT
 T A G C T G C A T A G C A C G T A C T G C G T A A T G C G C T A A T G C G T A C G T A C C A T G A T C G A T C G T A C G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

PB0102.1_Zic2_1/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CACTGACACCCGGGGG---
----CCCCCCCGGGGGGGT
 T A G C T G C A T A G C A C G T A C T G C G T A A T G C G C T A A T G C G T A C G T A C C A T G A T C G A T C G T A C G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CACTGACACCCGGGGG
-VBTGWCAGCB-----
 T A G C T G C A T A G C A C G T A C T G C G T A A T G C G C T A A T G C G T A C G T A C C A T G A T C G A T C G T A C G A T C G
A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CACTGACACCCGGGGG
ATAAATGACACCTATCA-
 A C G T A C G T T A G C T G C A T A G C A C G T A C T G C G T A A T G C G C T A A T G C G T A C G T A C C A T G A T C G A T C G T A C G A T C G
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CACTGACACCCGGGGG
--TTGACAG-------
 T A G C T G C A T A G C A C G T A C T G C G T A A T G C G C T A A T G C G T A C G T A C C A T G A T C G A T C G T A C G A T C G
A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CACTGACACCCGGGGG---
----GACCCCCCGCTGTGC
 T A G C T G C A T A G C A C G T A C T G C G T A A T G C G C T A A T G C G T A C G T A C C A T G A T C G A T C G T A C G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CACTGACACCCGGGGG
---TGACCYCT-----
 T A G C T G C A T A G C A C G T A C T G C G T A A T G C G C T A A T G C G T A C G T A C C A T G A T C G A T C G T A C G A T C G
A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CACTGACACCCGGGGG------
-----ANTNCCGGGGGGAANTT
 T A G C T G C A T A G C A C G T A C T G C G T A A T G C G C T A A T G C G T A C G T A C C A T G A T C G A T C G T A C G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CACTGACACCCGGGGG
TGAGTGACAGSC-----
 A C G T T A G C T G C A T A G C A C G T A C T G C G T A A T G C G C T A A T G C G T A C G T A C C A T G A T C G A T C G T A C G A T C G
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T A C G T A C G T A C G T