Information for 8-TTTTCTTTCTGAA (Motif 4)

A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C T G C G T A G C T A
Reverse Opposite:
C A G T A C G T A G T C C G T A A C T G T C G A C G T A C G T A A C T G C G T A G T C A C G T A C G T A
p-value:1e-13
log p-value:-3.064e+01
Information Content per bp:1.906
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.8 +/- 33.2bp
Average Position of motif in Background36.9 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTTTCTTTCTGAA---
NAGTTTCABTHTGACTNW
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C T G C G T A G C T A A C G T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TTTTCTTTCTGAA--
CTTTCANTATGACTV
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C T G C G T A G C T A A C G T A C G T
A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTTTCTTTCTGAA
TTTTTTTTCNNGTN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C T G C G T A G C T A
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTTTCTTTCTGAA
ACTTTCGTTTCT---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C T G C G T A G C T A
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TTTTCTTTCTGAA-
NNNNTTTTTTTTTNAAC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C T G C G T A G C T A A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

PB0116.1_Elf3_2/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TTTTCTTTCTGAA-
GNATTTTTTTTTTGANC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C T G C G T A G C T A A C G T
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

CDX2/MA0465.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTTTCTTTCTGAA
TTTTATGGCTN--
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C T G C G T A G C T A
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTTTCTTTCTGAA
NTTTTATGAC----
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C T G C G T A G C T A
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTTTCTTTCTGAA--
-NNTTTTTCTTATNT
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C T G C G T A G C T A A C G T A C G T
A C G T A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TTTTCTTTCTGAA
--CACTTCCTGT-
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C T G C G T A G C T A
A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T