Information for 6-AAWHTTTAAATWTTTA (Motif 10)

G T C A T C G A G C A T G C T A C G A T A G C T C A G T G C T A T C G A C T G A C G A T G C A T G C A T G A C T G C A T C G T A
Reverse Opposite:
G C A T C G T A C T G A C G T A C G T A C G T A G A C T A G C T C G A T G C T A C T G A C G T A C G A T C G T A A G C T C A G T
p-value:1e-9
log p-value:-2.236e+01
Information Content per bp:1.523
Number of Target Sequences with motif59.0
Percentage of Target Sequences with motif6.77%
Number of Background Sequences with motif1278.4
Percentage of Background Sequences with motif2.67%
Average Position of motif in Targets42.4 +/- 27.5bp
Average Position of motif in Background51.2 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0172.1_Tlx2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AAWHTTTAAATWTTTA
AANTTATTAATTAATTA
 A C G T G T C A T C G A G C A T G C T A C G A T A G C T C A G T G C T A T C G A C T G A C G A T G C A T G C A T G A C T G C A T C G T A
G C A T C G T A C T A G G A C T G C A T C G T A C G A T G A C T C G T A C G T A G C A T C G A T C T G A G C T A G A C T C G A T T G C A

PH0018.1_Dbx1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AAWHTTTAAATWTTTA
TNATTATTAATTAATTA
 A C G T G T C A T C G A G C A T G C T A C G A T A G C T C A G T G C T A T C G A C T G A C G A T G C A T G C A T G A C T G C A T C G T A
G A C T C G T A G C T A A G C T G A C T C G T A C G A T G C A T C G T A C G T A G C A T C G A T C G T A C G T A G A C T C G A T C T G A

Hoxd8/MA0910.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAWHTTTAAATWTTTA
NAGCCATTAATTANTTA
 A C G T G T C A T C G A G C A T G C T A C G A T A G C T C A G T G C T A T C G A C T G A C G A T G C A T G C A T G A C T G C A T C G T A
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

PH0080.1_Hoxd8/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAWHTTTAAATWTTTA
NAGCCATTAATTANTTA
 A C G T G T C A T C G A G C A T G C T A C G A T A G C T C A G T G C T A T C G A C T G A C G A T G C A T G C A T G A C T G C A T C G T A
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AAWHTTTAAATWTTTA
TTAATGTTTAACC-----
 A C G T A C G T G T C A T C G A G C A T G C T A C G A T A G C T C A G T G C T A T C G A C T G A C G A T G C A T G C A T G A C T G C A T C G T A
A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C A C G T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AAWHTTTAAATWTTTA
---ATTTGAATT----
 G T C A T C G A G C A T G C T A C G A T A G C T C A G T G C T A T C G A C T G A C G A T G C A T G C A T G A C T G C A T C G T A
A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AAWHTTTAAATWTTTA
TTAATNATTAAC------
 A C G T A C G T G T C A T C G A G C A T G C T A C G A T A G C T C A G T G C T A T C G A C T G A C G A T G C A T G C A T G A C T G C A T C G T A
A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AAWHTTTAAATWTTTA-
--NNATNAATTGTTTNN
 G T C A T C G A G C A T G C T A C G A T A G C T C A G T G C T A T C G A C T G A C G A T G C A T G C A T G A C T G C A T C G T A A C G T
A C G T A C G T G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

PH0095.1_Lhx5/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AAWHTTTAAATWTTTA-
ANNATTTAATTAATTNN
 G T C A T C G A G C A T G C T A C G A T A G C T C A G T G C T A T C G A C T G A C G A T G C A T G C A T G A C T G C A T C G T A A C G T
T C G A C A T G C A G T C G T A C G A T G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T C A G T G A T C A T C G

Arid5a/MA0602.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAWHTTTAAATWTTTA
CTAATATTGCTAAA----
 A C G T A C G T G T C A T C G A G C A T G C T A C G A T A G C T C A G T G C T A T C G A C T G A C G A T G C A T G C A T G A C T G C A T C G T A
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A A C G T A C G T A C G T A C G T