Information for 3-ATTGGCAATG (Motif 6)

G T C A G C A T C A G T C A T G A C T G T G A C C G T A T C G A C G A T A C T G
Reverse Opposite:
T G A C G C T A A G C T G C A T A C T G T G A C G T A C G T C A C G T A C A G T
p-value:1e-11
log p-value:-2.634e+01
Information Content per bp:1.597
Number of Target Sequences with motif171.0
Percentage of Target Sequences with motif21.38%
Number of Background Sequences with motif6096.4
Percentage of Background Sequences with motif12.62%
Average Position of motif in Targets49.9 +/- 25.2bp
Average Position of motif in Background49.8 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-ATTGGCAATG
NNTTGGCANN-
 A C G T G T C A G C A T C A G T C A T G A C T G T G A C C G T A T C G A C G A T A C T G
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ATTGGCAATG
CTTGGCAA--
 G T C A G C A T C A G T C A T G A C T G T G A C C G T A T C G A C G A T A C T G
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ATTGGCAATG
-TTGGCA---
 G T C A G C A T C A G T C A T G A C T G T G A C C G T A T C G A C G A T A C T G
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ATTGGCAATG
NTTGGCANN-
 G T C A G C A T C A G T C A T G A C T G T G A C C G T A T C G A C G A T A C T G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ATTGGCAATG
NATGGAAAAN
 G T C A G C A T C A G T C A T G A C T G T G A C C G T A T C G A C G A T A C T G
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ATTGGCAATG------
NNTNNACAATGGGANNN
 A C G T G T C A G C A T C A G T C A T G A C T G T G A C C G T A T C G A C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ATTGGCAATG--
---GACAATGNN
 G T C A G C A T C A G T C A T G A C T G T G A C C G T A T C G A C G A T A C T G A C G T A C G T
A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATTGGCAATG--
WATGCAAATGAG
 G T C A G C A T C A G T C A T G A C T G T G A C C G T A T C G A C G A T A C T G A C G T A C G T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ATTGGCAATG
--TGGAAAA-
 G T C A G C A T C A G T C A T G A C T G T G A C C G T A T C G A C G A T A C T G
A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:ATTGGCAATG-
---TGGAATGT
 G T C A G C A T C A G T C A T G A C T G T G A C C G T A T C G A C G A T A C T G A C G T
A C G T A C G T A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T