Information for 5-TGGCTCCGGG (Motif 10)

A C G T C T A G C A T G A G T C A C G T A G T C A T G C A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A T C G C T A G C G T A C T A G G T A C A G T C C G T A
p-value:1e-9
log p-value:-2.081e+01
Information Content per bp:1.894
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif48.4
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets47.8 +/- 30.2bp
Average Position of motif in Background51.3 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:forward strand
Alignment:TGGCTCCGGG
--GCTCCG--
 A C G T C T A G C A T G A G T C A C G T A G T C A T G C A C T G A C T G A C T G
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGGCTCCGGG--
TGCCCNGGGGCA
 A C G T C T A G C A T G A G T C A C G T A G T C A T G C A C T G A C T G A C T G A C G T A C G T
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

TFAP2B/MA0811.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGGCTCCGGG--
TGCCCTNGGGCA
 A C G T C T A G C A T G A G T C A C G T A G T C A T G C A C T G A C T G A C T G A C G T A C G T
G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGGCTCCGGG--
TGCCCTNGGGCA
 A C G T C T A G C A T G A G T C A C G T A G T C A T G C A C T G A C T G A C T G A C G T A C G T
G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGGCTCCGGG
NRYTTCCGGY
 A C G T C T A G C A T G A G T C A C G T A G T C A T G C A C T G A C T G A C T G
G A T C C T G A A G T C C G A T C G A T G A T C A G T C A C T G A T C G A G C T

SPDEF/MA0686.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGGCTCCGGG-
TACATCCGGGT
 A C G T C T A G C A T G A G T C A C G T A G T C A T G C A C T G A C T G A C T G A C G T
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGGCTCCGGG---
NTGCCCTAGGGCAA
 A C G T A C G T C T A G C A T G A G T C A C G T A G T C A T G C A C T G A C T G A C T G A C G T A C G T A C G T
C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A

PB0113.1_E2F3_2/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TGGCTCCGGG--
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C A T G A G T C A C G T A G T C A T G C A C T G A C T G A C T G A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0077.1_Spdef_1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGGCTCCGGG-----
GTACATCCGGATTTTT
 A C G T A C G T C T A G C A T G A G T C A C G T A G T C A T G C A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGGCTCCGGG-
-ACATCCTGNT
 A C G T C T A G C A T G A G T C A C G T A G T C A T G C A C T G A C T G A C T G A C G T
A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T