Information for 13-CGCACAAAGCCGG (Motif 14)

A T G C A C T G A G T C C G T A G T A C C G T A C G T A C G T A A C T G A G T C A G T C A C T G A T C G
Reverse Opposite:
A T G C A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G A G T C A T C G
p-value:1e-3
log p-value:-8.856e+00
Information Content per bp:1.940
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.25%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.5 +/- 26.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CGCACAAAGCCGG
VRRACAAWGG---
 A T G C A C T G A G T C C G T A G T A C C G T A C G T A C G T A A C T G A G T C A G T C A C T G A T C G
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CGCACAAAGCCGG
GGAACAAAGR---
 A T G C A C T G A G T C C G T A G T A C C G T A C G T A C G T A A C T G A G T C A G T C A C T G A T C G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CGCACAAAGCCGG
---ACAAAG----
 A T G C A C T G A G T C C G T A G T A C C G T A C G T A C G T A A C T G A G T C A G T C A C T G A T C G
A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGCACAAAGCCGG
AAAACAAAGG---
 A T G C A C T G A G T C C G T A G T A C C G T A C G T A C G T A A C T G A G T C A G T C A C T G A T C G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CGCACAAAGCCGG--
---ACAAAGGNBCCT
 A T G C A C T G A G T C C G T A G T A C C G T A C G T A C G T A A C T G A G T C A G T C A C T G A T C G A C G T A C G T
A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

PB0199.1_Zfp161_2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGCACAAAGCCGG
GCCGCGCAGTGCGT-
 A C G T A C G T A T G C A C T G A G T C C G T A G T A C C G T A C G T A C G T A A C T G A G T C A G T C A C T G A T C G
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CGCACAAAGCCGG
--RACAAWGG---
 A T G C A C T G A G T C C G T A G T A C C G T A C G T A C G T A A C T G A G T C A G T C A C T G A T C G
A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGCACAAAGCCGG
CTCACACAATGGCGC
 A C G T A C G T A T G C A C T G A G T C C G T A G T A C C G T A C G T A C G T A A C T G A G T C A G T C A C T G A T C G
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

CENPB/MA0637.1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CGCACAAAGCCGG
TTCGTNNNANGCGGG
 A C G T A C G T A T G C A C T G A G T C C G T A G T A C C G T A C G T A C G T A A C T G A G T C A G T C A C T G A T C G
C A G T C G A T A G T C C A T G A G C T C G A T A T C G A C G T C T G A G C A T T C A G T G A C C T A G C T A G C T A G

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CGCACAAAGCCGG
--AACAAAGG---
 A T G C A C T G A G T C C G T A G T A C C G T A C G T A C G T A A C T G A G T C A G T C A C T G A T C G
A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T