Information for 4-AVYAAAACAAAAWAAA (Motif 11)

C G T A T C A G A G C T G C T A G T C A C T G A C G T A A T G C G T C A G T C A C T G A C T G A G C A T C T G A C G T A G T C A
Reverse Opposite:
A C G T A C G T G A C T C G T A G A C T A G C T A C G T A C G T T A C G G A C T G A C T A C G T C G A T T C G A A G T C C G A T
p-value:1e-10
log p-value:-2.360e+01
Information Content per bp:1.692
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.34%
Number of Background Sequences with motif155.4
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets57.4 +/- 21.7bp
Average Position of motif in Background46.3 +/- 35.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0123.1_Foxl1_2/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--AVYAAAACAAAAWAAA
ATATCAAAACAAAACA--
 A C G T A C G T C G T A T C A G A G C T G C T A G T C A C T G A C G T A A T G C G T C A G T C A C T G A C T G A G C A T C T G A C G T A G T C A
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AVYAAAACAAAAWAAA-
--CAAAAGTAAACAAAG
 C G T A T C A G A G C T G C T A G T C A C T G A C G T A A T G C G T C A G T C A C T G A C T G A G C A T C T G A C G T A G T C A A C G T
A C G T A C G T G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

PB0093.1_Zfp105_1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AVYAAAACAAAAWAAA
-AACAAACAACAAGAG
 C G T A T C A G A G C T G C T A G T C A C T G A C G T A A T G C G T C A G T C A C T G A C T G A G C A T C T G A C G T A G T C A
A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0121.1_Foxj3_2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AVYAAAACAAAAWAAA
AACACCAAAACAAAGGA--
 A C G T A C G T A C G T C G T A T C A G A G C T G C T A G T C A C T G A C G T A A T G C G T C A G T C A C T G A C T G A G C A T C T G A C G T A G T C A
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AVYAAAACAAAAWAAA--
-GTTAAAAAAAAAAATTA
 C G T A T C A G A G C T G C T A G T C A C T G A C G T A A T G C G T C A G T C A C T G A C T G A G C A T C T G A C G T A G T C A A C G T A C G T
A C G T T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0071.1_Sox4_1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AVYAAAACAAAAWAAA-
AGAAGAACAAAGGACTA
 C G T A T C A G A G C T G C T A G T C A C T G A C G T A A T G C G T C A G T C A C T G A C T G A G C A T C T G A C G T A G T C A A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AVYAAAACAAAAWAAA
---AAAACAAAGG---
 C G T A T C A G A G C T G C T A G T C A C T G A C G T A A T G C G T C A G T C A C T G A C T G A G C A T C T G A C G T A G T C A
A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AVYAAAACAAAAWAAA-
ATAAGAACAAAGGACTA
 C G T A T C A G A G C T G C T A G T C A C T G A C G T A A T G C G T C A G T C A C T G A C T G A G C A T C T G A C G T A G T C A A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AVYAAAACAAAAWAAA
--TACTGGAAAAAAAA
 C G T A T C A G A G C T G C T A G T C A C T G A C G T A A T G C G T C A G T C A C T G A C T G A G C A T C T G A C G T A G T C A
A C G T A C G T G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

Mecom/MA0029.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AVYAAAACAAAAWAAA-
---AAGATAAGATAACA
 C G T A T C A G A G C T G C T A G T C A C T G A C G T A A T G C G T C A G T C A C T G A C T G A G C A T C T G A C G T A G T C A A C G T
A C G T A C G T A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A