Information for 10-ATTAAWRTMTTTK (Motif 8)

C G T A A C G T A C G T C G T A C G T A C G T A C T A G A G C T G T A C C G A T A C G T A C G T A C G T
Reverse Opposite:
G T C A C G T A G T C A C G T A A C T G C T G A A G T C C G A T A C G T A C G T C G T A C G T A A C G T
p-value:1e-11
log p-value:-2.659e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets29.0 +/- 29.5bp
Average Position of motif in Background72.3 +/- 10.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3b/MA0601.1/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---ATTAAWRTMTTTK
NTAATTAATAT-----
 A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A C G T A C T A G A G C T G T A C C G A T A C G T A C G T A C G T
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ATTAAWRTMTTTK
ATTAAA-------
 C G T A A C G T A C G T C G T A C G T A C G T A C T A G A G C T G T A C C G A T A C G T A C G T A C G T
C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0088.1_Isl2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ATTAAWRTMTTTK-
AAATTAATTGATTTNG
 A C G T A C G T C G T A A C G T A C G T C G T A C G T A C G T A C T A G A G C T G T A C C G A T A C G T A C G T A C G T A C G T
C T G A G C T A G T C A G A C T G C A T C G T A C G T A A C G T A C G T C T A G T C G A C A G T C A G T C A G T C G A T C A T G

Hoxd8/MA0910.1/Jaspar

Match Rank:4
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------ATTAAWRTMTTTK
TAAATAATTAATGGCTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A C G T A C T A G A G C T G T A C C G A T A C G T A C G T A C G T
C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A A C G T A C G T

PH0080.1_Hoxd8/Jaspar

Match Rank:5
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------ATTAAWRTMTTTK
TAAATAATTAATGGCTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A C G T A C T A G A G C T G T A C C G A T A C G T A C G T A C G T
C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A A C G T A C G T

GSX2/MA0893.1/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ATTAAWRTMTTTK
ACTAATTAAA-------
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A C G T A C T A G A G C T G T A C C G A T A C G T A C G T A C G T
G T C A A T G C G A C T G T C A C G T A G C A T G C A T G C T A T C G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NKX6-2/MA0675.1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ATTAAWRTMTTTK
CTAATTAA--------
 A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A C G T A C T A G A G C T G T A C C G A T A C G T A C G T A C G T
A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATTAAWRTMTTTK
CCTTAATNGNTTTT
 A C G T C G T A A C G T A C G T C G T A C G T A C G T A C T A G A G C T G T A C C G A T A C G T A C G T A C G T
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

PH0172.1_Tlx2/Jaspar

Match Rank:9
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------ATTAAWRTMTTTK
TAATTAATTAATAACTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A C G T A C T A G A G C T G T A C C G A T A C G T A C G T A C G T
A C G T G C T A C T G A C G A T G A C T C G T A C G T A G A C T G A C T C T G A C G T A G C A T C G T A C T G A G A T C C G A T C G A T A C G T A C G T

NKX6-1/MA0674.1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATTAAWRTMTTTK
GTAATTAA--------
 A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A C G T A C T A G A G C T G T A C C G A T A C G T A C G T A C G T
T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T