Information for 5-GAAATGSCWCCWCCTS (Motif 3)

T A C G G T C A C G T A G T C A A C G T A C T G T A G C A T G C C G T A G T A C A G T C G C T A A G T C A G T C A G C T A T C G
Reverse Opposite:
T A C G C T G A T C A G A C T G C G A T A C T G C A T G C G A T A T C G A T C G G T A C T G C A C A G T G C A T A C G T A T G C
p-value:1e-18
log p-value:-4.146e+01
Information Content per bp:1.656
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.45%
Number of Background Sequences with motif72.4
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets53.3 +/- 22.8bp
Average Position of motif in Background51.5 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAAATGSCWCCWCCTS
ATAAATGACACCTATCA
 A C G T T A C G G T C A C G T A G T C A A C G T A C T G T A G C A T G C C G T A G T A C A G T C G C T A A G T C A G T C A G C T A T C G
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

SP1/MA0079.3/Jaspar

Match Rank:2
Score:0.63
Offset:6
Orientation:forward strand
Alignment:GAAATGSCWCCWCCTS-
------GCCCCGCCCCC
 T A C G G T C A C G T A G T C A A C G T A C T G T A G C A T G C C G T A G T A C A G T C G C T A A G T C A G T C A G C T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:GAAATGSCWCCWCCTS--
------GCTCCGCCCMCY
 T A C G G T C A C G T A G T C A A C G T A C T G T A G C A T G C C G T A G T A C A G T C G C T A A G T C A G T C A G C T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GAAATGSCWCCWCCTS---
----NRGCCCCRCCCHBNN
 T A C G G T C A C G T A G T C A A C G T A C T G T A G C A T G C C G T A G T A C A G T C G C T A A G T C A G T C A G C T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

POL003.1_GC-box/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GAAATGSCWCCWCCTS--
----NAGCCCCGCCCCCN
 T A C G G T C A C G T A G T C A A C G T A C T G T A G C A T G C C G T A G T A C A G T C G C T A A G T C A G T C A G C T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.59
Offset:7
Orientation:forward strand
Alignment:GAAATGSCWCCWCCTS
-------ATCCAC---
 T A C G G T C A C G T A G T C A A C G T A C T G T A G C A T G C C G T A G T A C A G T C G C T A A G T C A G T C A G C T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:7
Score:0.59
Offset:6
Orientation:forward strand
Alignment:GAAATGSCWCCWCCTS
------GCCCCGCCCC
 T A C G G T C A C G T A G T C A A C G T A C T G T A G C A T G C C G T A G T A C A G T C G C T A A G T C A G T C A G C T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GAAATGSCWCCWCCTS-
-----GGCCCCGCCCCC
 T A C G G T C A C G T A G T C A A C G T A C T G T A G C A T G C C G T A G T A C A G T C G C T A A G T C A G T C A G C T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

SP2/MA0516.1/Jaspar

Match Rank:9
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GAAATGSCWCCWCCTS-----
------GCCCCGCCCCCTCCC
 T A C G G T C A C G T A G T C A A C G T A C T G T A G C A T G C C G T A G T A C A G T C G C T A A G T C A G T C A G C T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GAAATGSCWCCWCCTS
----TGACACCT----
 T A C G G T C A C G T A G T C A A C G T A C T G T A G C A T G C C G T A G T A C A G T C G C T A A G T C A G T C A G C T A T C G
A C G T A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T