Information for 6-KTCACTGAAA (Motif 8)

C A T G A C G T A G T C C G T A A T G C C G A T C T A G C G T A G T C A C G T A
Reverse Opposite:
A C G T A C G T A C G T A G T C G C T A A T C G A C G T A C T G C G T A G T A C
p-value:1e-10
log p-value:-2.468e+01
Information Content per bp:1.837
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.75%
Number of Background Sequences with motif230.1
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets41.7 +/- 23.9bp
Average Position of motif in Background52.0 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0005.1_Bbx_1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---KTCACTGAAA--
NANTTCATTGAATTA
 A C G T A C G T A C G T C A T G A C G T A G T C C G T A A T G C C G A T C T A G C G T A G T C A C G T A A C G T A C G T
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--KTCACTGAAA----
CAATCACTGGCAGAAT
 A C G T A C G T C A T G A C G T A G T C C G T A A T G C C G A T C T A G C G T A G T C A C G T A A C G T A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:KTCACTGAAA---
---ACTGAAACCA
 C A T G A C G T A G T C C G T A A T G C C G A T C T A G C G T A G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

Pax2/MA0067.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-KTCACTGAAA
AGTCACGC---
 A C G T C A T G A C G T A G T C C G T A A T G C C G A T C T A G C G T A G T C A C G T A
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-KTCACTGAAA-
TTTCTNAGAAAN
 A C G T C A T G A C G T A G T C C G T A A T G C C G A T C T A G C G T A G T C A C G T A A C G T
A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T

STAT1/MA0137.3/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-KTCACTGAAA
TTTCCTGGAAA
 A C G T C A T G A C G T A G T C C G T A A T G C C G A T C T A G C G T A G T C A C G T A
G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:KTCACTGAAA--
BTGABTGACAGS
 C A T G A C G T A G T C C G T A A T G C C G A T C T A G C G T A G T C A C G T A A C G T A C G T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:KTCACTGAAA--
NTGATTGACAGN
 C A T G A C G T A G T C C G T A A T G C C G A T C T A G C G T A G T C A C G T A A C G T A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Stat4/MA0518.1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----KTCACTGAAA
NNNTTTCCTGGAAA
 A C G T A C G T A C G T A C G T C A T G A C G T A G T C C G T A A T G C C G A T C T A G C G T A G T C A C G T A
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--KTCACTGAAA--
ATTTCCNGGAAATN
 A C G T A C G T C A T G A C G T A G T C C G T A A T G C C G A T C T A G C G T A G T C A C G T A A C G T A C G T
C T G A G A C T A C G T A C G T G T A C G A T C G C T A C T A G C A T G C G T A C G T A C T G A G A C T T A C G