Information for 3-CAGRGGGCGCTGY (Motif 2)

A T G C G T C A A T C G C T A G C A T G T C A G T A C G T G A C C T A G A T G C A G C T A T C G A G C T
Reverse Opposite:
T C G A A T G C T C G A A T C G G A T C A C T G A T G C A G T C G A T C A G T C A T G C C A G T T A C G
p-value:1e-55
log p-value:-1.268e+02
Information Content per bp:1.676
Number of Target Sequences with motif100.0
Percentage of Target Sequences with motif11.45%
Number of Background Sequences with motif698.6
Percentage of Background Sequences with motif1.45%
Average Position of motif in Targets49.2 +/- 23.2bp
Average Position of motif in Background49.2 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----CAGRGGGCGCTGY--
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T A T G C G T C A A T C G C T A G C A T G T C A G T A C G T G A C C T A G A T G C A G C T A T C G A G C T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------CAGRGGGCGCTGY
TGGCCACCAGGGGGCGCTA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T C A A T C G C T A G C A T G T C A G T A C G T G A C C T A G A T G C A G C T A T C G A G C T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CAGRGGGCGCTGY-
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A T G C G T C A A T C G C T A G C A T G T C A G T A C G T G A C C T A G A T G C A G C T A T C G A G C T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CAGRGGGCGCTGY
-RGKGGGCGGAGC
 A T G C G T C A A T C G C T A G C A T G T C A G T A C G T G A C C T A G A T G C A G C T A T C G A G C T
A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CAGRGGGCGCTGY--
AAGGKGRCGCAGGCA
 A T G C G T C A A T C G C T A G C A T G T C A G T A C G T G A C C T A G A T G C A G C T A T C G A G C T A C G T A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

INSM1/MA0155.1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CAGRGGGCGCTGY
TGTCAGGGGGCG----
 A C G T A C G T A C G T A T G C G T C A A T C G C T A G C A T G T C A G T A C G T G A C C T A G A T G C A G C T A T C G A G C T
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAGRGGGCGCTGY
-RGKGGGCGKGGC
 A T G C G T C A A T C G C T A G C A T G T C A G T A C G T G A C C T A G A T G C A G C T A T C G A G C T
A C G T C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------CAGRGGGCGCTGY
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T C A A T C G C T A G C A T G T C A G T A C G T G A C C T A G A T G C A G C T A T C G A G C T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

SP8/MA0747.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CAGRGGGCGCTGY
-AGTGGGCGTGGC
 A T G C G T C A A T C G C T A G C A T G T C A G T A C G T G A C C T A G A T G C A G C T A T C G A G C T
A C G T C T G A T C A G A C G T T C A G A T C G A T C G T G A C C A T G C A G T C A T G C A T G A G T C

EGR1/MA0162.2/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CAGRGGGCGCTGY
GGCGGGGGCGGGGG
 A C G T A T G C G T C A A T C G C T A G C A T G T C A G T A C G T G A C C T A G A T G C A G C T A T C G A G C T
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G