Information for 13-GASAAWTAGTCAT (Motif 22)

A C T G C T G A A T G C C G T A C G T A C G T A A G C T C G T A A C T G A C G T G T A C C G T A A C G T
Reverse Opposite:
G T C A A C G T A C T G C G T A G T A C A C G T C T G A C G A T A C G T A C G T T A C G A G C T A G T C
p-value:1e-10
log p-value:-2.363e+01
Information Content per bp:1.849
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif16.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets72.5 +/- 14.0bp
Average Position of motif in Background46.9 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GASAAWTAGTCAT---
-NNAATTAGTCACGGT
 A C T G C T G A A T G C C G T A C G T A C G T A A G C T C G T A A C T G A C G T G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GASAAWTAGTCAT
---GAATATTCAT
 A C T G C T G A A T G C C G T A C G T A C G T A A G C T C G T A A C T G A C G T G T A C C G T A A C G T
A C G T A C G T A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

JDP2/MA0655.1/Jaspar

Match Rank:3
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:GASAAWTAGTCAT
----ATGAGTCAT
 A C T G C T G A A T G C C G T A C G T A C G T A A G C T C G T A A C T G A C G T G T A C C G T A A C G T
A C G T A C G T A C G T A C G T C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T

NFE2/MA0841.1/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GASAAWTAGTCAT-
---GATGAGTCATN
 A C T G C T G A A T G C C G T A C G T A C G T A A G C T C G T A A C T G A C G T G T A C C G T A A C G T A C G T
A C G T A C G T A C G T T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GASAAWTAGTCAT-
--NNATGASTCATH
 A C T G C T G A A T G C C G T A C G T A C G T A A G C T C G T A A C T G A C G T G T A C C G T A A C G T A C G T
A C G T A C G T A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:6
Score:0.63
Offset:8
Orientation:reverse strand
Alignment:GASAAWTAGTCAT-
--------GTCATN
 A C T G C T G A A T G C C G T A C G T A C G T A A G C T C G T A A C T G A C G T G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GASAAWTAGTCAT
-TGAATTATGCAT
 A C T G C T G A A T G C C G T A C G T A C G T A A G C T C G T A A C T G A C G T G T A C C G T A A C G T
A C G T C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

JUN(var.2)/MA0489.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GASAAWTAGTCAT
AGGAGATGACTCAT
 A C G T A C T G C T G A A T G C C G T A C G T A C G T A A G C T C G T A A C T G A C G T G T A C C G T A A C G T
C T G A C T A G C T A G C T G A C T A G T C G A A C G T A C T G C G T A A T G C C G A T G T A C C G T A A C G T

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GASAAWTAGTCAT--
---GATGAGTCATCC
 A C T G C T G A A T G C C G T A C G T A C G T A A G C T C G T A A C T G A C G T G T A C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T C G A G A C T A C T G C G T A A T C G C G A T T G A C C G T A A G C T G A T C G T A C

MF0010.1_Homeobox_class/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GASAAWTAGTCAT
---AATTATT---
 A C T G C T G A A T G C C G T A C G T A C G T A A G C T C G T A A C T G A C G T G T A C C G T A A C G T
A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T