Information for 8-RACAATGAGCAAT (Motif 18)

C T G A C G T A T A G C C G T A C T G A C G A T A C T G G C T A A C T G A T G C C G T A C G T A A C G T
Reverse Opposite:
C G T A C G A T C G A T A T C G A G T C C G A T A G T C C G T A A G C T A C G T A C T G A C G T A G C T
p-value:1e-10
log p-value:-2.456e+01
Information Content per bp:1.841
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.5 +/- 26.8bp
Average Position of motif in Background56.5 +/- 14.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0132.1_Hbp1_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----RACAATGAGCAAT
NNTNNACAATGGGANNN
 A C G T A C G T A C G T A C G T C T G A C G T A T A G C C G T A C T G A C G A T A C T G G C T A A C T G A T G C C G T A C G T A A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:RACAATGAGCAAT
GACAATGNN----
 C T G A C G T A T A G C C G T A C T G A C G A T A C T G G C T A A C T G A T G C C G T A C G T A A C G T
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:RACAATGAGCAAT-----
-NNNNTGAGCACTGTNNG
 C T G A C G T A T A G C C G T A C T G A C G A T A C T G G C T A A C T G A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

SOX8/MA0868.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:RACAATGAGCAAT---
AACAATGTGCAGTGTT
 C T G A C G T A T A G C C G T A C T G A C G A T A C T G G C T A A C T G A T G C C G T A C G T A A C G T A C G T A C G T A C G T
C G T A C G T A G T A C C T G A C G T A A C G T C T A G C G A T A C T G A G T C C G T A C A T G A C G T A C T G C G A T A G C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--RACAATGAGCAAT
VRRACAAWGG-----
 A C G T A C G T C T G A C G T A T A G C C G T A C T G A C G A T A C T G G C T A A C T G A T G C C G T A C G T A A C G T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:RACAATGAGCAAT
-ACAAAG------
 C T G A C G T A T A G C C G T A C T G A C G A T A C T G G C T A A C T G A T G C C G T A C G T A A C G T
A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--RACAATGAGCAAT
AAAACAATGG-----
 A C G T A C G T C T G A C G T A T A G C C G T A C T G A C G A T A C T G G C T A A C T G A T G C C G T A C G T A A C G T
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--RACAATGAGCAAT
VRAACAATGG-----
 A C G T A C G T C T G A C G T A T A G C C G T A C T G A C G A T A C T G G C T A A C T G A T G C C G T A C G T A A C G T
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---RACAATGAGCAAT-
AAACATAATGAGGTTGC
 A C G T A C G T A C G T C T G A C G T A T A G C C G T A C T G A C G A T A C T G G C T A A C T G A T G C C G T A C G T A A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-RACAATGAGCAAT
GAACAATGGN----
 A C G T C T G A C G T A T A G C C G T A C T G A C G A T A C T G G C T A A C T G A T G C C G T A C G T A A C G T
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T A C G T