Information for 6-RGCAACAGCTGTT (Motif 4)

T C A G T C A G G T A C G C T A T C G A T A G C C G T A T C A G G T A C C G A T A T C G A G C T A C G T
Reverse Opposite:
G T C A C T G A T A G C C G T A C A T G A G T C C G A T A C T G A G C T C A G T A C T G A G T C A G T C
p-value:1e-16
log p-value:-3.852e+01
Information Content per bp:1.684
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif5.05%
Number of Background Sequences with motif189.6
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets43.9 +/- 24.8bp
Average Position of motif in Background53.6 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf21/MA0832.1/Jaspar

Match Rank:1
Score:0.91
Offset:1
Orientation:forward strand
Alignment:RGCAACAGCTGTT--
-GCAACAGCTGTTGT
 T C A G T C A G G T A C G C T A T C G A T A G C C G T A T C A G G T A C C G A T A T C G A G C T A C G T A C G T A C G T
A C G T T C A G G A T C C T G A G T C A A G T C G T C A A C T G A G T C A C G T A C T G A C G T G A C T T C A G A G C T

MSC/MA0665.1/Jaspar

Match Rank:2
Score:0.90
Offset:3
Orientation:reverse strand
Alignment:RGCAACAGCTGTT
---AACAGCTGTT
 T C A G T C A G G T A C G C T A T C G A T A G C C G T A T C A G G T A C C G A T A T C G A G C T A C G T
A C G T A C G T A C G T T C G A T C G A G T A C C G T A A T C G A T G C A C G T T A C G A C G T G A C T

MYF6/MA0667.1/Jaspar

Match Rank:3
Score:0.89
Offset:3
Orientation:reverse strand
Alignment:RGCAACAGCTGTT
---AACAGCTGTT
 T C A G T C A G G T A C G C T A T C G A T A G C C G T A T C A G G T A C C G A T A T C G A G C T A C G T
A C G T A C G T A C G T T C G A C T G A A T G C C G T A T C A G A G T C A G C T A C T G A G C T A G C T

TFAP4/MA0691.1/Jaspar

Match Rank:4
Score:0.85
Offset:3
Orientation:reverse strand
Alignment:RGCAACAGCTGTT
---ATCAGCTGTT
 T C A G T C A G G T A C G C T A T C G A T A G C C G T A T C A G G T A C C G A T A T C G A G C T A C G T
A C G T A C G T A C G T T C G A G C A T A T G C C G T A A T C G T A G C A C G T A C T G C G A T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:5
Score:0.84
Offset:2
Orientation:forward strand
Alignment:RGCAACAGCTGTT
--BAACAGCTGT-
 T C A G T C A G G T A C G C T A T C G A T A G C C G T A T C A G G T A C C G A T A T C G A G C T A C G T
A C G T A C G T A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:RGCAACAGCTGTT
-NNAGCAGCTGCT
 T C A G T C A G G T A C G C T A T C G A T A G C C G T A T C A G G T A C C G A T A T C G A G C T A C G T
A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:RGCAACAGCTGTT
--CAGCAGCTGN-
 T C A G T C A G G T A C G C T A T C G A T A G C C G T A T C A G G T A C C G A T A T C G A G C T A C G T
A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:8
Score:0.82
Offset:3
Orientation:reverse strand
Alignment:RGCAACAGCTGTT
---AGCAGCTGCT
 T C A G T C A G G T A C G C T A T C G A T A G C C G T A T C A G G T A C C G A T A T C G A G C T A C G T
A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:9
Score:0.82
Offset:5
Orientation:reverse strand
Alignment:RGCAACAGCTGTT
-----CAGCTGTT
 T C A G T C A G G T A C G C T A T C G A T A G C C G T A T C A G G T A C C G A T A T C G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:10
Score:0.81
Offset:4
Orientation:reverse strand
Alignment:RGCAACAGCTGTT-
----CCAGCTGTTN
 T C A G T C A G G T A C G C T A T C G A T A G C C G T A T C A G G T A C C G A T A T C G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A