Information for 3-CAAGCTGTCA (Motif 3)

G T A C T G C A C T G A C T A G A G T C C G A T C T A G C G A T T A G C C T G A
Reverse Opposite:
G A C T A T C G G C T A G A T C C G T A T C A G G A T C G A C T A C G T C A T G
p-value:1e-17
log p-value:-3.966e+01
Information Content per bp:1.568
Number of Target Sequences with motif130.0
Percentage of Target Sequences with motif29.82%
Number of Background Sequences with motif6598.1
Percentage of Background Sequences with motif13.85%
Average Position of motif in Targets59.1 +/- 23.9bp
Average Position of motif in Background49.8 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0169.1_Tgif1/Jaspar

Match Rank:1
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--CAAGCTGTCA-----
NNNCAGCTGTCAATATN
 A C G T A C G T G T A C T G C A C T G A C T A G A G T C C G A T C T A G C G A T T A G C C T G A A C G T A C G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.81
Offset:3
Orientation:reverse strand
Alignment:CAAGCTGTCA-
---GCTGTCAA
 G T A C T G C A C T G A C T A G A G T C C G A T C T A G C G A T T A G C C T G A A C G T
A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

PH0170.1_Tgif2/Jaspar

Match Rank:3
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--CAAGCTGTCA----
AACTAGCTGTCAATAC
 A C G T A C G T G T A C T G C A C T G A C T A G A G T C C G A T C T A G C G A T T A G C C T G A A C G T A C G T A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.79
Offset:2
Orientation:forward strand
Alignment:CAAGCTGTCA--
--VGCTGWCAVB
 G T A C T G C A C T G A C T A G A G T C C G A T C T A G C G A T T A G C C T G A A C G T A C G T
A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

MEIS3/MA0775.1/Jaspar

Match Rank:5
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:CAAGCTGTCA-
---CCTGTCAA
 G T A C T G C A C T G A C T A G A G T C C G A T C T A G C G A T T A G C C T G A A C G T
A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

PH0102.1_Meis1/Jaspar

Match Rank:6
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--CAAGCTGTCA----
AACGAGCTGTCAATAC
 A C G T A C G T G T A C T G C A C T G A C T A G A G T C C G A T C T A G C G A T T A G C C T G A A C G T A C G T A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

MEIS1/MA0498.2/Jaspar

Match Rank:7
Score:0.78
Offset:4
Orientation:reverse strand
Alignment:CAAGCTGTCA-
----NTGTCAN
 G T A C T G C A C T G A C T A G A G T C C G A T C T A G C G A T T A G C C T G A A C G T
A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:CAAGCTGTCA
--ARNTGACA
 G T A C T G C A C T G A C T A G A G T C C G A T C T A G C G A T T A G C C T G A
A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A

PH0105.1_Meis3/Jaspar

Match Rank:9
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CAAGCTGTCA----
AATTACCTGTCAATAC
 A C G T A C G T G T A C T G C A C T G A C T A G A G T C C G A T C T A G C G A T T A G C C T G A A C G T A C G T A C G T A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

PH0104.1_Meis2/Jaspar

Match Rank:10
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CAAGCTGTCA----
AAAGACCTGTCAATAC
 A C G T A C G T G T A C T G C A C T G A C T A G A G T C C G A T C T A G C G A T T A G C C T G A A C G T A C G T A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C