Information for 12-CGGGCGCCAA (Motif 18)

A G T C A C T G A C T G A C T G A G T C A C T G A G T C A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C T G A G T C A C T G A G T C A G T C A G T C A C T G
p-value:1e-5
log p-value:-1.332e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets62.6 +/- 16.2bp
Average Position of motif in Background55.4 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1/MA0024.3/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CGGGCGCCAA-
TTTGGCGCCAAA
 A C G T A G T C A C T G A C T G A C T G A G T C A C T G A G T C A G T C C G T A C G T A A C G T
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---CGGGCGCCAA----
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A G T C A C T G A C T G A C T G A G T C A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

PB0113.1_E2F3_2/Jaspar

Match Rank:3
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---CGGGCGCCAA----
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T A G T C A C T G A C T G A C T G A G T C A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CGGGCGCCAA
AGCGCGCC--
 A G T C A C T G A C T G A C T G A G T C A C T G A G T C A G T C C G T A C G T A
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CGGGCGCCAA-
--CGTGCCAAG
 A G T C A C T G A C T G A C T G A G T C A C T G A G T C A G T C C G T A C G T A A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CGGGCGCCAA
----TGCCAA
 A G T C A C T G A C T G A C T G A G T C A C T G A G T C A G T C C G T A C G T A
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGGGCGCCAA--
RGGGCACTAACY
 A G T C A C T G A C T G A C T G A G T C A C T G A G T C A G T C C G T A C G T A A C G T A C G T
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

PB0052.1_Plagl1_1/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CGGGCGCCAA---
TTGGGGGCGCCCCTAG
 A C G T A C G T A C G T A G T C A C T G A C T G A C T G A G T C A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CGGGCGCCAA--
--GGCGGGAAAH
 A G T C A C T G A C T G A C T G A G T C A C T G A G T C A G T C C G T A C G T A A C G T A C G T
A C G T A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T

PB0009.1_E2F3_1/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CGGGCGCCAA---
ANCGCGCGCCCTTNN
 A C G T A C G T A G T C A C T G A C T G A C T G A G T C A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T