Information for 3-GCTGTGBTAAHAGGAC (Motif 3)

A C T G A G T C A C G T A C T G C G A T A C T G A C T G A C G T C G T A C T G A G A C T C G T A A C T G T C A G C G T A A G T C
Reverse Opposite:
A C T G C G A T A G T C A G T C C G A T C A G T A G C T C G A T C G T A T A G C A G T C C G T A A G T C G T C A C T A G A G T C
p-value:1e-13
log p-value:-3.163e+01
Information Content per bp:1.779
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.35%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.7 +/- 23.2bp
Average Position of motif in Background56.2 +/- 10.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCTGTGBTAAHAGGAC
GCTGTGGTTT------
 A C T G A G T C A C G T A C T G C G A T A C T G A C T G A C G T C G T A C T G A G A C T C G T A A C T G T C A G C G T A A G T C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCTGTGBTAAHAGGAC
GCTGTG----------
 A C T G A G T C A C G T A C T G C G A T A C T G A C T G A C G T C G T A C T G A G A C T C G T A A C T G T C A G C G T A A G T C
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GCTGTGBTAAHAGGAC
NNTCCTGCTGTGNNN-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G A T A C T G A C T G A C G T C G T A C T G A G A C T C G T A A C T G T C A G C G T A A G T C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCTGTGBTAAHAGGAC
TGCTGTGATTT------
 A C G T A C T G A G T C A C G T A C T G C G A T A C T G A C T G A C G T C G T A C T G A G A C T C G T A A C T G T C A G C G T A A G T C
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCTGTGBTAAHAGGAC
-CTGTGGTTTN-----
 A C T G A G T C A C G T A C T G C G A T A C T G A C T G A C G T C G T A C T G A G A C T C G T A A C T G T C A G C G T A A G T C
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCTGTGBTAAHAGGAC
GTCTGTGGTTT------
 A C G T A C T G A G T C A C G T A C T G C G A T A C T G A C T G A C G T C G T A C T G A G A C T C G T A A C T G T C A G C G T A A G T C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCTGTGBTAAHAGGAC
NNHTGTGGTTWN-----
 A C G T A C T G A G T C A C G T A C T G C G A T A C T G A C T G A C G T C G T A C T G A G A C T C G T A A C T G T C A G C G T A A G T C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCTGTGBTAAHAGGAC
GCAGTGATTT------
 A C T G A G T C A C G T A C T G C G A T A C T G A C T G A C G T C G T A C T G A G A C T C G T A A C T G T C A G C G T A A G T C
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCTGTGBTAAHAGGAC
NNTGTGGTTT------
 A C T G A G T C A C G T A C T G C G A T A C T G A C T G A C G T C G T A C T G A G A C T C G T A A C T G T C A G C G T A A G T C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GCTGTGBTAAHAGGAC
TNTCCTGCTGTGNNG-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G A T A C T G A C T G A C G T C G T A C T G A G A C T C G T A A C T G T C A G C G T A A G T C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T