Information for 13-GCCTGAGGGGCCA (Motif 16)

A C T G A T G C A G T C A C G T A C T G C G T A A C T G A C T G A C T G A C T G A G T C A T G C C G T A
Reverse Opposite:
C G A T A T C G A C T G A G T C A G T C A G T C A G T C A C G T A G T C C G T A A C T G A T C G A G T C
p-value:1e-4
log p-value:-1.142e+01
Information Content per bp:1.952
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.5 +/- 31.5bp
Average Position of motif in Background60.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.3/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGAGGGGCCA
NGCCTGAGGCN---
 A C G T A C T G A T G C A G T C A C G T A C T G C G T A A C T G A C T G A C T G A C T G A G T C A T G C C G T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGAGGGGCCA
TGCCTGAGGCN---
 A C G T A C T G A T G C A G T C A C G T A C T G C G T A A C T G A C T G A C T G A C T G A G T C A T G C C G T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:3
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GCCTGAGGGGCCA
WTGSCCTSAGGS----
 A C G T A C G T A C G T A C T G A T G C A G T C A C G T A C T G C G T A A C T G A C T G A C T G A C T G A G T C A T G C C G T A
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GCCTGAGGGGCCA
ATTGCCTGAGGCAAT-
 A C G T A C G T A C G T A C T G A T G C A G T C A C G T A C T G C G T A A C T G A C T G A C T G A C T G A G T C A T G C C G T A
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GCCTGAGGGGCCA
ATTGCCTGAGGCGAA-
 A C G T A C G T A C G T A C T G A T G C A G T C A C G T A C T G C G T A A C T G A C T G A C T G A C T G A G T C A T G C C G T A
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGAGGGGCCA
NGCCTNAGGCN---
 A C G T A C T G A T G C A G T C A C G T A C T G C G T A A C T G A C T G A C T G A C T G A G T C A T G C C G T A
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGAGGGGCCA
TGCCCTNAGGGCA-
 A C G T A C T G A T G C A G T C A C G T A C T G C G T A A C T G A C T G A C T G A C T G A G T C A T G C C G T A
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GCCTGAGGGGCCA
ATGCCCTGAGGC----
 A C G T A C G T A C G T A C T G A T G C A G T C A C G T A C T G C G T A A C T G A C T G A C T G A C T G A G T C A T G C C G T A
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:9
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GCCTGAGGGGCCA
ATTCCCTGAGGGGAA-
 A C G T A C G T A C G T A C T G A T G C A G T C A C G T A C T G C G T A A C T G A C T G A C T G A C T G A G T C A T G C C G T A
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGAGGGGCCA
TGCCCNGGGGCA--
 A C G T A C T G A T G C A G T C A C G T A C T G C G T A A C T G A C T G A C T G A C T G A G T C A T G C C G T A
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T