Information for 11-TCAGTTAATC (Motif 15)

A C G T A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C G T C G T A C G T A A G T C A C G T A C T G C G T A
p-value:1e-4
log p-value:-1.142e+01
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.3 +/- 26.3bp
Average Position of motif in Background39.6 +/- 11.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0125.1_Obox5_2/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TCAGTTAATC------
GATAATTAATCCCTCTT
 A C G T A C G T A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T

PH0167.1_Tcf1/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TCAGTTAATC----
NTTTTAGTTAACNNAGN
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

PB0081.1_Tcf1_1/Jaspar

Match Rank:3
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TCAGTTAATC----
NNNTTAGTTAACTNANN
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

PH0123.1_Obox3/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TCAGTTAATC-------
ATAGTTAATCCCCCNNA
 A C G T A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

PH0124.1_Obox5_1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TCAGTTAATC------
NANANTTAATCCCNNNN
 A C G T A C G T A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

OTX2/MA0712.1/Jaspar

Match Rank:6
Score:0.70
Offset:4
Orientation:forward strand
Alignment:TCAGTTAATC--
----TTAATCCT
 A C G T A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

OTX1/MA0711.1/Jaspar

Match Rank:7
Score:0.69
Offset:4
Orientation:forward strand
Alignment:TCAGTTAATC--
----TTAATCCG
 A C G T A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TCAGTTAATC---
---NYTAATCCYB
 A C G T A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:9
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TCAGTTAATC-
---GCTAATCC
 A C G T A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G T C A C G T
A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C

Pitx1/MA0682.1/Jaspar

Match Rank:10
Score:0.69
Offset:4
Orientation:forward strand
Alignment:TCAGTTAATC--
----TTAATCCC
 A C G T A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C