Information for 10-AAAGCAATAAATT (Motif 9)

C T G A C G T A C G T A C T A G A G T C G T C A T C G A G C A T C G T A C G T A C G T A A G C T A G C T
Reverse Opposite:
C T G A C T G A G C A T G A C T C G A T C G T A A C G T A C G T A C T G A G T C A C G T A C G T A G C T
p-value:1e-13
log p-value:-3.029e+01
Information Content per bp:1.792
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif26.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets47.8 +/- 26.3bp
Average Position of motif in Background45.5 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0006.1_Barhl2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AAAGCAATAAATT-
AAAAACCAATTAAGAA
 A C G T A C G T C T G A C G T A C G T A C T A G A G T C G T C A T C G A G C A T C G T A C G T A C G T A A G C T A G C T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

PH0064.1_Hoxb9/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AAAGCAATAAATT---
AGAGCCATAAAATTCG
 C T G A C G T A C G T A C T A G A G T C G T C A T C G A G C A T C G T A C G T A C G T A A G C T A G C T A C G T A C G T A C G T
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G

Hmx1/MA0896.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AAAGCAATAAATT---
ACAAGCAATTAATGAAT
 A C G T C T G A C G T A C G T A C T A G A G T C G T C A T C G A G C A T C G T A C G T A C G T A A G C T A G C T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AAAGCAATAAATT---
ACAAGCAATTAATGAAT
 A C G T C T G A C G T A C G T A C T A G A G T C G T C A T C G A G C A T C G T A C G T A C G T A A G C T A G C T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AAAGCAATAAATT
AAAAAATCAATAAT--
 A C G T A C G T A C G T C T G A C G T A C G T A C T A G A G T C G T C A T C G A G C A T C G T A C G T A C G T A A G C T A G C T
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AAAGCAATAAATT
-AAGCCATAAAA-
 C T G A C G T A C G T A C T A G A G T C G T C A T C G A G C A T C G T A C G T A C G T A A G C T A G C T
A C G T T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T

Hmx2/MA0897.1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAAGCAATAAATT---
ACAAGCAATTAAAGAAT
 A C G T C T G A C G T A C G T A C T A G A G T C G T C A T C G A G C A T C G T A C G T A C G T A A G C T A G C T A C G T A C G T A C G T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

PH0042.1_Hmx2/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAAGCAATAAATT---
ACAAGCAATTAAAGAAT
 A C G T C T G A C G T A C G T A C T A G A G T C G T C A T C G A G C A T C G T A C G T A C G T A A G C T A G C T A C G T A C G T A C G T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

PH0013.1_Cdx2/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAAGCAATAAATT--
AAAGGTAATAAAATTT
 A C G T C T G A C G T A C G T A C T A G A G T C G T C A T C G A G C A T C G T A C G T A C G T A A G C T A G C T A C G T A C G T
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

Hoxc9/MA0485.1/Jaspar

Match Rank:10
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AAAGCAATAAATT--
--GGCCATAAATCAC
 C T G A C G T A C G T A C T A G A G T C G T C A T C G A G C A T C G T A C G T A C G T A A G C T A G C T A C G T A C G T
A C G T A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C