p-value: | 1e-15 |
log p-value: | -3.668e+01 |
Information Content per bp: | 1.839 |
Number of Target Sequences with motif | 42.0 |
Percentage of Target Sequences with motif | 5.26% |
Number of Background Sequences with motif | 504.7 |
Percentage of Background Sequences with motif | 1.07% |
Average Position of motif in Targets | 45.2 +/- 20.5bp |
Average Position of motif in Background | 51.4 +/- 32.8bp |
Strand Bias (log2 ratio + to - strand density) | -0.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer
Match Rank: | 1 |
Score: | 0.80 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TTGCCACTTA- SCTGTCAVTCAV |
|
|
|
Nkx3-1/MA0124.2/Jaspar
Match Rank: | 2 |
Score: | 0.80 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTGCCACTTA- --ACCACTTAA |
|
|
|
NKX3-2/MA0122.2/Jaspar
Match Rank: | 3 |
Score: | 0.80 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTGCCACTTA- --ACCACTTAA |
|
|
|
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer
Match Rank: | 4 |
Score: | 0.76 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TTGCCACTTA- NCTGTCAATCAN |
|
|
|
PB0048.1_Nkx3-1_1/Jaspar
Match Rank: | 5 |
Score: | 0.75 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TTGCCACTTA----- CTTAACCACTTAAGGAT |
|
|
|
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
Match Rank: | 6 |
Score: | 0.75 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TTGCCACTTA- -MRSCACTYAA |
|
|
|
ISL2/MA0914.1/Jaspar
Match Rank: | 7 |
Score: | 0.73 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TTGCCACTTA- ---GCACTTAA |
|
|
|
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer
Match Rank: | 8 |
Score: | 0.72 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TTGCCACTTA GSCTGTCACTCA |
|
|
|
NKX2-3/MA0672.1/Jaspar
Match Rank: | 9 |
Score: | 0.72 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTGCCACTTA-- --ACCACTTGAA |
|
|
|
PH0004.1_Nkx3-2/Jaspar
Match Rank: | 10 |
Score: | 0.72 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TTGCCACTTA----- CATAACCACTTAACAAC |
|
|
|