Information for 17-AGGTCGACTG (Motif 17)

C G T A C T A G C T A G A C G T G T A C C T A G C G T A T A G C G C A T T A C G
Reverse Opposite:
A T G C C G T A A T C G G C A T G A T C C A T G T G C A G A T C G A T C G C A T
p-value:1e-4
log p-value:-9.409e+00
Information Content per bp:1.512
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif25.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets48.4 +/- 25.4bp
Average Position of motif in Background53.3 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2F1/MA0017.2/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGGTCGACTG
CAAAGGTCAAGGG
 A C G T A C G T A C G T C G T A C T A G C T A G A C G T G T A C C T A G C G T A T A G C G C A T T A C G
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

PB0030.1_Hnf4a_1/Jaspar

Match Rank:2
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------AGGTCGACTG-
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G C T A G A C G T G T A C C T A G C G T A T A G C G C A T T A C G A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGGTCGACTG--
--BTBRAGTGSN
 C G T A C T A G C T A G A C G T G T A C C T A G C G T A T A G C G C A T T A C G A C G T A C G T
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Myb/MA0100.2/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGGTCGACTG---
---CCAACTGCCA
 C G T A C T A G C T A G A C G T G T A C C T A G C G T A T A G C G C A T T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A

PH0171.1_Nkx2-1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGGTCGACTG-----
AANTTCAAGTGGCTTN
 A C G T C G T A C T A G C T A G A C G T G T A C C T A G C G T A T A G C G C A T T A C G A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGGTCGACTG
AGGTCA----
 C G T A C T A G C T A G A C G T G T A C C T A G C G T A T A G C G C A T T A C G
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:7
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------AGGTCGACTG
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G C T A G A C G T G T A C C T A G C G T A T A G C G C A T T A C G
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

PB0149.1_Myb_2/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGGTCGACTG------
CGACCAACTGCCATGC
 C G T A C T A G C T A G A C G T G T A C C T A G C G T A T A G C G C A T T A C G A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------AGGTCGACTG-
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G C T A G A C G T G T A C C T A G C G T A T A G C G C A T T A C G A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AGGTCGACTG---
---CCAACTGCCA
 C G T A C T A G C T A G A C G T G T A C C T A G C G T A T A G C G C A T T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A