Information for 23-ARAAAAAAAARGM (Motif 24)

T C G A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C T G A G T C A C T G A T C A G G T C A
Reverse Opposite:
C A G T A G T C A G C T A C G T A G C T C G A T A C G T A G C T A C G T A C G T A G C T A G C T A G C T
p-value:1e-4
log p-value:-1.002e+01
Information Content per bp:1.743
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif223.1
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets41.7 +/- 23.4bp
Average Position of motif in Background51.0 +/- 43.8bp
Strand Bias (log2 ratio + to - strand density)2.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.83
Offset:-3
Orientation:forward strand
Alignment:---ARAAAAAAAARGM-
GTTAAAAAAAAAAATTA
 A C G T A C G T A C G T T C G A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C T G A G T C A C T G A T C A G G T C A A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---ARAAAAAAAARGM
TACTGGAAAAAAAA--
 A C G T A C G T A C G T T C G A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C T G A G T C A C T G A T C A G G T C A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:3
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----ARAAAAAAAARGM
GTTCAAAAAAAAAATTC
 A C G T A C G T A C G T A C G T T C G A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C T G A G T C A C T G A T C A G G T C A
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

PB0093.1_Zfp105_1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ARAAAAAAAARGM-
AACAAACAACAAGAG
 A C G T T C G A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C T G A G T C A C T G A T C A G G T C A A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0148.1_Mtf1_2/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----ARAAAAAAAARGM
AAATAAGAAAAAAC---
 A C G T A C G T A C G T A C G T T C G A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C T G A G T C A C T G A T C A G G T C A
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ARAAAAAAAARGM
--AAAACAAAGG-
 T C G A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C T G A G T C A C T G A T C A G G T C A
A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ARAAAAAAAARGM
CAAAAGTAAACAAAG--
 A C G T A C G T A C G T A C G T T C G A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C T G A G T C A C T G A T C A G G T C A
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T

PB0186.1_Tcf3_2/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ARAAAAAAAARGM
AGCCGAAAAAAAAAT--
 A C G T A C G T A C G T A C G T T C G A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C T G A G T C A C T G A T C A G G T C A
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ARAAAAAAAARGM---
ATAAGAACAAAGGACTA
 A C G T T C G A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C T G A G T C A C T G A T C A G G T C A A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ARAAAAAAAARGM---
AGAAGAACAAAGGACTA
 A C G T T C G A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C T G A G T C A C T G A T C A G G T C A A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A