Information for 15-GCCTGCGGTC (Motif 23)

A C T G G T A C A G T C A C G T A C T G A G T C A C T G A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A G T C A C T G A G T C C G T A A C T G A C T G A G T C
p-value:1e-6
log p-value:-1.519e+01
Information Content per bp:1.962
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif21.5
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets31.6 +/- 19.8bp
Average Position of motif in Background56.2 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2/MA0511.2/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GCCTGCGGTC-
--TTGCGGTTT
 A C T G G T A C A G T C A C G T A C T G A G T C A C T G A C T G A C G T A G T C A C G T
A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

RUNX3/MA0684.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCCTGCGGTC-
-TTTGCGGTTT
 A C T G G T A C A G T C A C G T A C T G A G T C A C T G A C T G A C G T A G T C A C G T
A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GCCTGCGGTC--
--CTGTGGTTTN
 A C T G G T A C A G T C A C G T A C T G A G T C A C T G A C T G A C G T A G T C A C G T A C G T
A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCCTGCGGTC-
GTCTGTGGTTT
 A C T G G T A C A G T C A C G T A C T G A G T C A C T G A C T G A C G T A G T C A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GCCTGCGGTC--
TCACCTCTGGGCAG
 A C G T A C G T A C T G G T A C A G T C A C G T A C T G A G T C A C T G A C T G A C G T A G T C A C G T A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCCTGCGGTC-
-GCTGTGGTTT
 A C T G G T A C A G T C A C G T A C T G A G T C A C T G A C T G A C G T A G T C A C G T
A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGCGGTC
TGCCTGAGGCN
 A C G T A C T G G T A C A G T C A C G T A C T G A G T C A C T G A C T G A C G T A G T C
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCCTGCGGTC--
NNHTGTGGTTWN
 A C T G G T A C A G T C A C G T A C T G A G T C A C T G A C T G A C G T A G T C A C G T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

TFAP2A/MA0003.3/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGCGGTC
NGCCTGAGGCN
 A C G T A C T G G T A C A G T C A C G T A C T G A G T C A C T G A C T G A C G T A G T C
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGCGGTC-
TGCCCNGGGGCA
 A C G T A C T G G T A C A G T C A C G T A C T G A G T C A C T G A C T G A C G T A G T C A C G T
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A