Information for 21-CGTGCGTGTTCGC (Motif 21)

A G T C A T C G A C G T A C T G A G T C A T C G A C G T A C T G A G C T A C G T A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G G T C A C T G A G T A C C G T A A T G C A C T G A G T C G T C A A T G C C T A G
p-value:1e-6
log p-value:-1.565e+01
Information Content per bp:1.843
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.2 +/- 26.5bp
Average Position of motif in Background57.0 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CGTGCGTGTTCGC
--TGCGTG-----
 A G T C A T C G A C G T A C T G A G T C A T C G A C G T A C T G A G C T A C G T A G T C A C T G A G T C
A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGTGCGTGTTCGC
-CTGCGCATGCGC
 A G T C A T C G A C G T A C T G A G T C A T C G A C G T A C T G A G C T A C G T A G T C A C T G A G T C
A C G T A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

EGR2/MA0472.2/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CGTGCGTGTTCGC
--TGCGTGGGCGT
 A G T C A T C G A C G T A C T G A G T C A T C G A C G T A C T G A G C T A C G T A G T C A C T G A G T C
A C G T A C G T G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T

NRF(NRF)/Promoter/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGTGCGTGTTCGC
-GTGCGCATGCGC
 A G T C A T C G A C G T A C T G A G T C A T C G A C G T A C T G A G C T A C G T A G T C A C T G A G T C
A C G T A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C

NRF1/MA0506.1/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CGTGCGTGTTCGC-
---GCGCCTGCGCA
 A G T C A T C G A C G T A C T G A G T C A T C G A C G T A C T G A G C T A C G T A G T C A C T G A G T C A C G T
A C G T A C G T A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

GLI2/MA0734.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CGTGCGTGTTCGC
-CAGTGTGGTCGC
 A G T C A T C G A C G T A C T G A G T C A T C G A C G T A C T G A G C T A C G T A G T C A C T G A G T C
A C G T G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

EGR3/MA0732.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGTGCGTGTTCGC--
ANTGCGTGGGCGTNN
 A G T C A T C G A C G T A C T G A G T C A T C G A C G T A C T G A G C T A C G T A G T C A C T G A G T C A C G T A C G T
C G T A C T A G G A C T C T A G A G T C T A C G A C G T T C A G C T A G A T C G G A T C C T A G C A G T C T G A C T A G

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGTGCGTGTTCGC----
-NNGCGTGTGTGCNGCN
 A G T C A T C G A C G T A C T G A G T C A T C G A C G T A C T G A G C T A C G T A G T C A C T G A G T C A C G T A C G T A C G T A C G T
A C G T C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CGTGCGTGTTCGC
-TTGCGTGCVA--
 A G T C A T C G A C G T A C T G A G T C A T C G A C G T A C T G A G C T A C G T A G T C A C T G A G T C
A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CGTGCGTGTTCGC
--TGCGTGGGYG-
 A G T C A T C G A C G T A C T G A G T C A T C G A C G T A C T G A G C T A C G T A G T C A C T G A G T C
A C G T A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T