Information for 14-GTTCCCTTWG (Motif 20)

A C T G A C G T C G A T A G T C A G T C A G T C A C G T A G C T C G A T A C T G
Reverse Opposite:
G T A C G C T A C T G A C G T A A C T G A C T G A C T G C G T A C G T A A G T C
p-value:1e-6
log p-value:-1.580e+01
Information Content per bp:1.880
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif53.8
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets36.7 +/- 25.4bp
Average Position of motif in Background53.7 +/- 34.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTTCCCTTWG
CTGACCTTTG
 A C T G A C G T C G A T A G T C A G T C A G T C A C G T A G C T C G A T A C T G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GTTCCCTTWG--
----CCTTTGTT
 A C T G A C G T C G A T A G T C A G T C A G T C A C G T A G C T C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTTCCCTTWG
GTGACCTT--
 A C T G A C G T C G A T A G T C A G T C A G T C A C G T A G C T C G A T A C T G
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GTTCCCTTWG--
GGGTGTGCCCAAAAGG
 A C G T A C G T A C G T A C G T A C T G A C G T C G A T A G T C A G T C A G T C A C G T A G C T C G A T A C T G A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

PB0053.1_Rara_1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTTCCCTTWG---
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T A C T G A C G T C G A T A G T C A G T C A G T C A C G T A G C T C G A T A C T G A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GTTCCCTTWG----
--TNCCTTTGATGT
 A C T G A C G T C G A T A G T C A G T C A G T C A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTTCCCTTWG---
NGTTGCCATGGCAA
 A C G T A C T G A C G T C G A T A G T C A G T C A G T C A C G T A G C T C G A T A C T G A C G T A C G T A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GTTCCCTTWG
TKCTGTTCCA----
 A C G T A C G T A C G T A C G T A C T G A C G T C G A T A G T C A G T C A G T C A C G T A G C T C G A T A C T G
A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T A C G T A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GTTCCCTTWG--
--AACCTTATAT
 A C T G A C G T C G A T A G T C A G T C A G T C A C G T A G C T C G A T A C T G A C G T A C G T
A C G T A C G T C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTTCCCTTWG
BNTGDCCTTG-
 A C G T A C T G A C G T C G A T A G T C A G T C A G T C A C G T A G C T C G A T A C T G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T