Information for 12-GTTCCCGTGCTGC (Motif 9)

A C T G C G A T A C G T A G T C A G T C T A G C A C T G A C G T A T C G A G T C C G A T A C T G A T G C
Reverse Opposite:
A T C G A G T C G C T A A C T G T A G C C G T A T G A C A C T G C T A G C T A G T C G A C G T A T A G C
p-value:1e-9
log p-value:-2.248e+01
Information Content per bp:1.764
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif58.2
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets43.0 +/- 28.5bp
Average Position of motif in Background51.7 +/- 37.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GTTCCCGTGCTGC----
--TCNCCTGCTGNGNNN
 A C T G C G A T A C G T A G T C A G T C T A G C A C T G A C G T A T C G A G T C C G A T A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GTTCCCGTGCTGC-
--CCCCCTGCTGTG
 A C T G C G A T A C G T A G T C A G T C T A G C A C T G A C G T A T C G A G T C C G A T A C T G A T G C A C G T
A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GTTCCCGTGCTGC----
--TNTCCTGCTGTGNNG
 A C T G C G A T A C G T A G T C A G T C T A G C A C T G A C G T A T C G A G T C C G A T A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTTCCCGTGCTGC--
GGCCYCCTGCTGDGH
 A C T G C G A T A C G T A G T C A G T C T A G C A C T G A C G T A T C G A G T C C G A T A C T G A T G C A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

POL011.1_XCPE1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTTCCCGTGCTGC
GGTCCCGCCC---
 A C T G C G A T A C G T A G T C A G T C T A G C A C T G A C G T A T C G A G T C C G A T A C T G A T G C
A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T A C G T

Id2/MA0617.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GTTCCCGTGCTGC
--TCACGTGC---
 A C T G C G A T A C G T A G T C A G T C T A G C A C T G A C G T A T C G A G T C C G A T A C T G A T G C
A C G T A C G T G A C T A G T C C G T A A G T C A C T G A C G T A C T G A G T C A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GTTCCCGTGCTGC----
--NNTCCTGCTGTGNNN
 A C T G C G A T A C G T A G T C A G T C T A G C A C T G A C G T A T C G A G T C C G A T A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GTTCCCGTGCTGC-
----CNGTCCTCCC
 A C T G C G A T A C G T A G T C A G T C T A G C A C T G A C G T A T C G A G T C C G A T A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GTTCCCGTGCTGC
NGKCACGTGM---
 A C T G C G A T A C G T A G T C A G T C T A G C A C T G A C G T A T C G A G T C C G A T A C T G A T G C
T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C A C G T A C G T A C G T

BHLHE40/MA0464.2/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GTTCCCGTGCTGC
-GTCACGTGAN--
 A C T G C G A T A C G T A G T C A G T C T A G C A C T G A C G T A T C G A G T C C G A T A C T G A T G C
A C G T C T A G C A G T T G A C C T G A A G T C C T A G A C G T C A T G G T C A A C G T A C G T A C G T