Information for 13-TTTGCATCAAGGA (Motif 10)

A C G T A C G T A C G T A T C G A G T C C G T A A C G T A G T C G T C A C G T A C T A G A C T G C G T A
Reverse Opposite:
A C G T G T A C A G T C A C G T A C G T C T A G C G T A A C G T A C T G A T G C C G T A C G T A C G T A
p-value:1e-10
log p-value:-2.467e+01
Information Content per bp:1.928
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.0 +/- 20.4bp
Average Position of motif in Background41.6 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TTTGCATCAAGGA
ATTGCATCAK---
 A C G T A C G T A C G T A T C G A G T C C G T A A C G T A G T C G T C A C G T A C T A G A C T G C G T A
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TTTGCATCAAGGA
ATTGCATCAT---
 A C G T A C G T A C G T A T C G A G T C C G T A A C G T A G T C G T C A C G T A C T A G A C T G C G T A
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TTTGCATCAAGGA
ATTTGCATAA----
 A C G T A C G T A C G T A C G T A T C G A G T C C G T A A C G T A G T C G T C A C G T A C T A G A C T G C G T A
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TTTGCATCAAGGA
-TTGCAACATN--
 A C G T A C G T A C G T A T C G A G T C C G T A A C G T A G T C G T C A C G T A C T A G A C T G C G T A
A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TTTGCATCAAGGA
TTCATTTGCATAT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A C G T A G T C G T C A C G T A C T A G A C T G C G T A
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTTGCATCAAGGA
BTVATTWGCATA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A C G T A G T C G T C A C G T A C T A G A C T G C G T A
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:7
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGCATCAAGGA
TNTAATTTGCATACNA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A C G T A G T C G T C A C G T A C T A G A C T G C G T A
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGCATCAAGGA
TNTAATTTGCATACNA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A C G T A G T C G T C A C G T A C T A G A C T G C G T A
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGCATCAAGGA
TNTAATTTGCATANNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A C G T A G T C G T C A C G T A C T A G A C T G C G T A
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTTGCATCAAGGA
ATTTGCATA-----
 A C G T A C G T A C G T A C G T A T C G A G T C C G T A A C G T A G T C G T C A C G T A C T A G A C T G C G T A
G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T A C G T A C G T A C G T A C G T