Information for 10-TCCGTCTCGC (Motif 14)

A C G T A G T C A T G C A C T G A C G T A G T C A C G T A G T C A C T G G T A C
Reverse Opposite:
A C T G G T A C C T A G C G T A A C T G G T C A A G T C A T C G A C T G G T C A
p-value:1e-10
log p-value:-2.336e+01
Information Content per bp:1.823
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif26.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets46.5 +/- 17.6bp
Average Position of motif in Background51.3 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TCCGTCTCGC
-CTGTCTGG-
 A C G T A G T C A T G C A C T G A C G T A G T C A C G T A G T C A C T G G T A C
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TCCGTCTCGC
GCTCGGSCTC--
 A C G T A C G T A C G T A G T C A T G C A C T G A C G T A G T C A C G T A G T C A C T G G T A C
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCCGTCTCGC
VBSYGTCTGG-
 A C G T A C G T A G T C A T G C A C T G A C G T A G T C A C G T A G T C A C T G G T A C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCCGTCTCGC----
-CTGTCTGTCACCT
 A C G T A G T C A T G C A C T G A C G T A G T C A C G T A G T C A C T G G T A C A C G T A C G T A C G T A C G T
A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TCCGTCTCGC----
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A G T C A T G C A C T G A C G T A G T C A C G T A G T C A C T G G T A C A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TCCGTCTCGC----
--TGTCTGDCACCT
 A C G T A G T C A T G C A C T G A C G T A G T C A C G T A G T C A C T G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

ZBTB33/MA0527.1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TCCGTCTCGC--------
---CTCTCGCGAGATCTG
 A C G T A G T C A T G C A C T G A C G T A G T C A C G T A G T C A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TCCGTCTCGC-----
NTNNCGTATCCAAGTNN
 A C G T A C G T A C G T A G T C A T G C A C T G A C G T A G T C A C G T A G T C A C T G G T A C A C G T A C G T A C G T A C G T A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

IRF8/MA0652.1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TCCGTCTCGC
AGTTTCGGTTTCGN
 A C G T A C G T A C G T A C G T A C G T A G T C A T G C A C T G A C G T A G T C A C G T A G T C A C T G G T A C
C T G A T A C G A C G T G C A T A G C T A G T C C T A G A T C G C G A T C G A T A C G T G A T C C T A G C T G A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCCGTCTCGC--
--GGTCTGGCAT
 A C G T A G T C A T G C A C T G A C G T A G T C A C G T A G T C A C T G G T A C A C G T A C G T
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T