Information for 8-AGCCTGCGAT (Motif 22)

G T C A A T C G A G T C A G T C G A C T A C T G A G T C C T A G C G T A A C G T
Reverse Opposite:
G T C A G C A T A G T C A C T G G T A C C T G A A C T G A C T G A T G C A C G T
p-value:1e-7
log p-value:-1.811e+01
Information Content per bp:1.844
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif96.7
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets41.8 +/- 25.4bp
Average Position of motif in Background51.4 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGCCTGCGAT
CAGCC------
 A C G T G T C A A T C G A G T C A G T C G A C T A C T G A G T C C T A G C G T A A C G T
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGCCTGCGAT
GCGCCTGCGCA
 A C G T G T C A A T C G A G T C A G T C G A C T A C T G A G T C C T A G C G T A A C G T
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AGCCTGCGAT
--GCTGTG--
 G T C A A T C G A G T C A G T C G A C T A C T G A G T C C T A G C G T A A C G T
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AGCCTGCGAT
TTGCGTGCVA-
 A C G T G T C A A T C G A G T C A G T C G A C T A C T G A G T C C T A G C G T A A C G T
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---AGCCTGCGAT
CTGCGCATGCGC-
 A C G T A C G T A C G T G T C A A T C G A G T C A G T C G A C T A C T G A G T C C T A G C G T A A C G T
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:6
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--AGCCTGCGAT-----
AATCCCTTTGATCTATC
 A C G T A C G T G T C A A T C G A G T C A G T C G A C T A C T G A G T C C T A G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AGCCTGCGAT
BCAGACWA----
 A C G T A C G T G T C A A T C G A G T C A G T C G A C T A C T G A G T C C T A G C G T A A C G T
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:8
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:AGCCTGCGAT-----
TGCCTGCGYCMCCTT
 G T C A A T C G A G T C A G T C G A C T A C T G A G T C C T A G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:AGCCTGCGAT-
TGCCTGAGGCN
 G T C A A T C G A G T C A G T C G A C T A C T G A G T C C T A G C G T A A C G T A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

Gfi1b/MA0483.1/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:AGCCTGCGAT--
-TGCTGTGATTT
 G T C A A T C G A G T C A G T C G A C T A C T G A G T C C T A G C G T A A C G T A C G T A C G T
A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T