p-value: | 1e-8 |
log p-value: | -2.024e+01 |
Information Content per bp: | 1.833 |
Number of Target Sequences with motif | 25.0 |
Percentage of Target Sequences with motif | 2.71% |
Number of Background Sequences with motif | 288.8 |
Percentage of Background Sequences with motif | 0.62% |
Average Position of motif in Targets | 58.7 +/- 24.1bp |
Average Position of motif in Background | 48.2 +/- 27.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 1 |
Score: | 0.68 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CTGGCAGAGC CTTGGCAA--- |
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Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer
Match Rank: | 2 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CTGGCAGAGC VBTGWCAGCB- |
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THAP1/MA0597.1/Jaspar
Match Rank: | 3 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CTGGCAGAGC TNNGGGCAG--- |
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NFIC/MA0161.1/Jaspar
Match Rank: | 4 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTGGCAGAGC TTGGCA---- |
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NFIX/MA0671.1/Jaspar
Match Rank: | 5 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CTGGCAGAGC NTTGGCANN-- |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 6 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CTGGCAGAGC GGTCTGGCAT--- |
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Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer
Match Rank: | 7 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CTGGCAGAGC ARNTGACA---- |
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Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer
Match Rank: | 8 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CTGGCAGAGC RHTGWCAR--- |
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PB0199.1_Zfp161_2/Jaspar
Match Rank: | 9 |
Score: | 0.59 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CTGGCAGAGC-- GCCGCGCAGTGCGT |
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PB0195.1_Zbtb3_2/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------CTGGCAGAGC CAATCACTGGCAGAAT |
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