Information for 4-CCGCTGTCTC (Motif 12)

A G T C A T G C A C T G A G T C G C A T A C T G A C G T A G T C A C G T A G T C
Reverse Opposite:
T C A G T G C A C T A G G T C A A G T C C G T A C T A G T G A C T A C G A C T G
p-value:1e-10
log p-value:-2.523e+01
Information Content per bp:1.827
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif3.69%
Number of Background Sequences with motif418.1
Percentage of Background Sequences with motif0.89%
Average Position of motif in Targets50.0 +/- 26.0bp
Average Position of motif in Background50.8 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myod1/MA0499.1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CCGCTGTCTC-
TGCAGCTGTCCCT
 A C G T A C G T A G T C A T G C A C T G A G T C G C A T A C T G A C G T A G T C A C G T A G T C A C G T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

Tcf12/MA0521.1/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CCGCTGTCTC
NNGCAGCTGTT--
 A C G T A C G T A C G T A G T C A T G C A C T G A G T C G C A T A C T G A C G T A G T C A C G T A G T C
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CCGCTGTCTC
CAGCTGTT--
 A G T C A T G C A C T G A G T C G C A T A C T G A C G T A G T C A C G T A G T C
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CCGCTGTCTC
NNGCAGCTGTC--
 A C G T A C G T A C G T A G T C A T G C A C T G A G T C G C A T A C T G A C G T A G T C A C G T A G T C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CCGCTGTCTC
--GCTGTG--
 A G T C A T G C A C T G A G T C G C A T A C T G A C G T A G T C A C G T A G T C
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CCGCTGTCTC-
---CTGTCTGG
 A G T C A T G C A C T G A G T C G C A T A C T G A C G T A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCGCTGTCTC
ACAGCTGTTV-
 A C G T A G T C A T G C A C T G A G T C G C A T A C T G A C G T A G T C A C G T A G T C
T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CCGCTGTCTC
NAHCAGCTGD---
 A C G T A C G T A C G T A G T C A T G C A C T G A G T C G C A T A C T G A C G T A G T C A C G T A G T C
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCGCTGTCTC
AGCAGCTGCTNN
 A C G T A C G T A G T C A T G C A C T G A G T C G C A T A C T G A C G T A G T C A C G T A G T C
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCGCTGTCTC
GCAGCTGTNN-
 A C G T A G T C A T G C A C T G A G T C G C A T A C T G A C G T A G T C A C G T A G T C
T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T