Information for 7-GGGAGGTTCC (Motif 8)

A C T G T A C G A C T G C G T A A C T G A T C G A C G T G A C T G A T C A T G C
Reverse Opposite:
A T C G C T A G C T G A C G T A A T G C T G A C G C A T T G A C A T G C G T A C
p-value:1e-10
log p-value:-2.383e+01
Information Content per bp:1.819
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.10%
Number of Background Sequences with motif131.2
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets54.3 +/- 21.6bp
Average Position of motif in Background50.8 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GGGAGGTTCC
GGGAATTTCC
 A C T G T A C G A C T G C G T A A C T G A T C G A C G T G A C T G A T C A T G C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GGGAGGTTCC
GGGAATTTCC
 A C T G T A C G A C T G C G T A A C T G A T C G A C G T G A C T G A T C A T G C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GGGAGGTTCC
GGGGATTTCC
 A C T G T A C G A C T G C G T A A C T G A T C G A C G T G A C T G A T C A T G C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GGGAGGTTCC
GGGGATTTCC
 A C T G T A C G A C T G C G T A A C T G A T C G A C G T G A C T G A T C A T G C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

PB0156.1_Plagl1_2/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GGGAGGTTCC----
GCTGGGGGGTACCCCTT
 A C G T A C G T A C G T A C T G T A C G A C T G C G T A A C T G A T C G A C G T G A C T G A T C A T G C A C G T A C G T A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGGAGGTTCC-
NGGGGATTTCCC
 A C G T A C T G T A C G A C T G C G T A A C T G A T C G A C G T G A C T G A T C A T G C A C G T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGGAGGTTCC
CGTGGGTGGTCC-
 A C G T A C G T A C G T A C T G T A C G A C T G C G T A A C T G A T C G A C G T G A C T G A T C A T G C
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T

HES7/MA0822.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGGAGGTTCC-
TGGCACGTGCCA
 A C G T A C T G T A C G A C T G C G T A A C T G A T C G A C G T G A C T G A T C A T G C A C G T
G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GGGAGGTTCC----
NNTTCTGGAANNTTCTAGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A C G A C T G C G T A A C T G A T C G A C G T G A C T G A T C A T G C A C G T A C G T A C G T A C G T
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A

PB0162.1_Sfpi1_2/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GGGAGGTTCC--------
----GGTTCCNNAATTTG
 A C T G T A C G A C T G C G T A A C T G A T C G A C G T G A C T G A T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A C T G C G A T G C A T A G T C A G T C A C T G C A T G G C T A C G T A C G A T G A C T C A G T C A T G