Information for 5-GCCGCAGCGCCCC (Motif 12)

A C T G A G T C A G T C A C T G A G T C C G T A A C T G A G T C A C T G A G T C A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C T G A G T C A C T G A G T C A C G T A C T G A G T C A C T G A C T G A G T C
p-value:1e-8
log p-value:-1.889e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.5 +/- 32.4bp
Average Position of motif in Background48.0 +/- 11.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GCCGCAGCGCCCC-
--GGCCCCGCCCCC
 A C T G A G T C A G T C A C T G A G T C C G T A A C T G A G T C A C T G A G T C A G T C A G T C A G T C A C G T
A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

PB0202.1_Zfp410_2/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCCGCAGCGCCCC-----
-TCACCCCGCCCCAAATT
 A C T G A G T C A G T C A C T G A G T C C G T A A C T G A G T C A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCCGCAGCGCCCC--
-NAGCCCCGCCCCCN
 A C T G A G T C A G T C A C T G A G T C C G T A A C T G A G T C A C T G A G T C A G T C A G T C A G T C A C G T A C G T
A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCCGCAGCGCCCC---
NNNGGGGCGCCCCCNN
 A C T G A G T C A G T C A C T G A G T C C G T A A C T G A G T C A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCCGCAGCGCCCC--
---GCTCCGCCCMCY
 A C T G A G T C A G T C A C T G A G T C C G T A A C T G A G T C A C T G A G T C A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCCGCAGCGCCCC------
--GGTCCCGCCCCCTTCTC
 A C T G A G T C A G T C A C T G A G T C C G T A A C T G A G T C A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

PB0110.1_Bcl6b_2/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCCGCAGCGCCCC-----
--ATCCCCGCCCCTAAAA
 A C T G A G T C A G T C A C T G A G T C C G T A A C T G A G T C A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCCGCAGCGCCCC-
--GGCCACRCCCMK
 A C T G A G T C A G T C A C T G A G T C C G T A A C T G A G T C A C T G A G T C A G T C A G T C A G T C A C G T
A C G T A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCCGCAGCGCCCC---
-NRGCCCCRCCCHBNN
 A C T G A G T C A G T C A C T G A G T C C G T A A C T G A G T C A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T
A C G T G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

KLF16/MA0741.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCCGCAGCGCCCC-
---GCCACGCCCCC
 A C T G A G T C A G T C A C T G A G T C C G T A A C T G A G T C A C T G A G T C A G T C A G T C A G T C A C G T
A C G T A C G T A C G T T C A G G T A C G T A C T G C A G T A C C T A G G T A C T A G C G A T C G T A C G A T C