Information for 18-GGGGCAGGCGGGCBGA (Motif 41)

A C T G A C T G A C T G A T C G A G T C C G T A A C T G A C T G A G T C C T A G C T A G A T C G A T G C A C G T A C T G C T G A
Reverse Opposite:
A G C T A G T C T C G A A T C G A T G C A G T C A G T C A C T G A G T C A G T C A C G T A C T G A T G C A G T C A G T C A G T C
p-value:1e-6
log p-value:-1.427e+01
Information Content per bp:1.838
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.7 +/- 28.1bp
Average Position of motif in Background36.5 +/- 5.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GGGGCAGGCGGGCBGA
AAGGKGRCGCAGGCA------
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A T C G A G T C C G T A A C T G A C T G A G T C C T A G C T A G A T C G A T G C A C G T A C T G C T G A
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:2
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGCAGGCGGGCBGA
NNTNNGGGGCGGNGNGN----
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A T C G A G T C C G T A A C T G A C T G A G T C C T A G C T A G A T C G A T G C A C G T A C T G C T G A
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A A C G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:3
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGCAGGCGGGCBGA
NNTNAGGGGCGGNNNN-----
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A T C G A G T C C G T A A C T G A C T G A G T C C T A G C T A G A T C G A T G C A C G T A C T G C T G A
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T A C G T A C G T A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGGGCAGGCGGGCBGA
GGGNGGGGGCGGGGC--
 A C G T A C T G A C T G A C T G A T C G A G T C C G T A A C T G A C T G A G T C C T A G C T A G A T C G A T G C A C G T A C T G C T G A
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGGGCAGGCGGGCBGA
-SDGCAGGTGCNS---
 A C T G A C T G A C T G A T C G A G T C C G T A A C T G A C T G A G T C C T A G C T A G A T C G A T G C A C G T A C T G C T G A
A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GGGGCAGGCGGGCBGA
GTGGGGGAGGGG------
 A C G T A C G T A C T G A C T G A C T G A T C G A G T C C G T A A C T G A C T G A G T C C T A G C T A G A T C G A T G C A C G T A C T G C T G A
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GGGGCAGGCGGGCBGA
------GGCGCGCT--
 A C T G A C T G A C T G A T C G A G T C C G T A A C T G A C T G A G T C C T A G C T A G A T C G A T G C A C G T A C T G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GGGGCAGGCGGGCBGA
---CCAGACRSVB---
 A C T G A C T G A C T G A T C G A G T C C G T A A C T G A C T G A G T C C T A G C T A G A T C G A T G C A C G T A C T G C T G A
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGGGCAGGCGGGCBGA
TGCGCAGGCGC-----
 A C T G A C T G A C T G A T C G A G T C C G T A A C T G A C T G A G T C C T A G C T A G A T C G A T G C A C G T A C T G C T G A
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGGGCAGGCGGGCBGA-
NAGANTGGCGGGGNGNA
 A C T G A C T G A C T G A T C G A G T C C G T A A C T G A C T G A G T C C T A G C T A G A T C G A T G C A C G T A C T G C T G A A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A