Information for 21-AAGAGCCAGCCCG (Motif 37)

C G T A C G T A A C T G C T G A A C T G A G T C A G T C C T G A A C T G A T G C A G T C A T G C A C T G
Reverse Opposite:
A G T C A T C G C T A G A T C G A G T C A G C T A C T G A C T G G T A C A G C T A G T C A C G T A C G T
p-value:1e-6
log p-value:-1.593e+01
Information Content per bp:1.928
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.4 +/- 28.9bp
Average Position of motif in Background51.1 +/- 14.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AAGAGCCAGCCCG
AGGTGNCAGACAG
 C G T A C G T A A C T G C T G A A C T G A G T C A G T C C T G A A C T G A T G C A G T C A T G C A C T G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAGAGCCAGCCCG
AGGTGHCAGACA-
 C G T A C G T A A C T G C T G A A C T G A G T C A G T C C T G A A C T G A T G C A G T C A T G C A C T G
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AAGAGCCAGCCCG
--ATGCCAGACN-
 C G T A C G T A A C T G C T G A A C T G A G T C A G T C C T G A A C T G A T G C A G T C A T G C A C T G
A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T

POL011.1_XCPE1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AAGAGCCAGCCCG
--GGTCCCGCCC-
 C G T A C G T A A C T G C T G A A C T G A G T C A G T C C T G A A C T G A T G C A G T C A T G C A C T G
A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:AAGAGCCAGCCCG
-----CTAGGCCT
 C G T A C G T A A C T G C T G A A C T G A G T C A G T C C T G A A C T G A T G C A G T C A T G C A C T G
A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:AAGAGCCAGCCCG
-----CCAGACAG
 C G T A C G T A A C T G C T G A A C T G A G T C A G T C C T G A A C T G A T G C A G T C A T G C A C T G
A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AAGAGCCAGCCCG
-CGTGCCAAG---
 C G T A C G T A A C T G C T G A A C T G A G T C A G T C C T G A A C T G A T G C A G T C A T G C A C T G
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:AAGAGCCAGCCCG
---TGCCAA----
 C G T A C G T A A C T G C T G A A C T G A G T C A G T C C T G A A C T G A T G C A G T C A T G C A C T G
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.51
Offset:6
Orientation:forward strand
Alignment:AAGAGCCAGCCCG
------CAGCC--
 C G T A C G T A A C T G C T G A A C T G A G T C A G T C C T G A A C T G A T G C A G T C A T G C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:forward strand
Alignment:AAGAGCCAGCCCG
--ATGCCAACC--
 C G T A C G T A A C T G C T G A A C T G A G T C A G T C C T G A A C T G A T G C A G T C A T G C A C T G
A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T