Information for 6-TGAGKGTCAAAGG (Motif 10)

A C G T A C T G G T C A C T A G A C G T A C T G A C G T T A G C C G T A G T C A C G T A A C T G A C T G
Reverse Opposite:
G T A C G T A C A C G T A C G T A C G T A T C G C G T A G T A C G T C A A G T C A C G T A G T C C G T A
p-value:1e-10
log p-value:-2.326e+01
Information Content per bp:1.809
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.2 +/- 18.6bp
Average Position of motif in Background48.2 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXRB/MA0855.1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TGAGKGTCAAAGG---
--GGGGTCAAAGGTCA
 A C G T A C T G G T C A C T A G A C G T A C T G A C G T T A G C C G T A G T C A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

Nr2f6/MA0677.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TGAGKGTCAAAGG---
--GAGGTCAAAGGTCA
 A C G T A C T G G T C A C T A G A C G T A C T G A C G T T A G C C G T A G T C A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

Rxra/MA0512.2/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TGAGKGTCAAAGG---
--GGGGTCAAAGGTCA
 A C G T A C T G G T C A C T A G A C G T A C T G A C G T T A G C C G T A G T C A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

RXRG/MA0856.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TGAGKGTCAAAGG---
--GGGGTCAAAGGTCA
 A C G T A C T G G T C A C T A G A C G T A C T G A C G T T A G C C G T A G T C A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

NR2C2/MA0504.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGAGKGTCAAAGG---
-AGGGGTCAGAGGTCA
 A C G T A C T G G T C A C T A G A C G T A C T G A C G T T A G C C G T A G T C A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGAGKGTCAAAGG---
--GAGGTCAAAGGTCA
 A C G T A C T G G T C A C T A G A C G T A C T G A C G T T A G C C G T A G T C A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGAGKGTCAAAGG
-CGGTTTCAAA--
 A C G T A C T G G T C A C T A G A C G T A C T G A C G T T A G C C G T A G T C A C G T A A C T G A C T G
A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGAGKGTCAAAGG---
-GTAGGGCAAAGGTCA
 A C G T A C T G G T C A C T A G A C G T A C T G A C G T T A G C C G T A G T C A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGAGKGTCAAAGG---
--TGGGGCAAAGGTCA
 A C G T A C T G G T C A C T A G A C G T A C T G A C G T T A G C C G T A G T C A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGAGKGTCAAAGG-----
-AAAGGTCAAAGGTCAAC
 A C G T A C T G G T C A C T A G A C G T A C T G A C G T T A G C C G T A G T C A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C