Information for 1-CKCCGCARWW (Motif 1)

A G T C A C G T A T G C A G T C A T C G A G T C C T G A T C A G G C T A G C A T
Reverse Opposite:
C G T A C G A T A G T C G A C T A C T G A T G C A C T G T A C G T G C A T C A G
p-value:1e-28
log p-value:-6.528e+01
Information Content per bp:1.663
Number of Target Sequences with motif166.0
Percentage of Target Sequences with motif22.71%
Number of Background Sequences with motif4152.8
Percentage of Background Sequences with motif8.92%
Average Position of motif in Targets50.6 +/- 24.0bp
Average Position of motif in Background49.9 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX3/MA0684.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CKCCGCARWW
AAACCGCAAA-
 A C G T A G T C A C G T A T G C A G T C A T C G A G T C C T G A T C A G G C T A G C A T
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CKCCGCARWW
AAACCGCAA--
 A C G T A G T C A C G T A T G C A G T C A T C G A G T C C T G A T C A G G C T A G C A T
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CKCCGCARWW
TACCCGCATN-
 A C G T A G T C A C G T A T G C A G T C A T C G A G T C C T G A T C A G G C T A G C A T
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CKCCGCARWW--
TCGTACCCGCATCATT
 A C G T A C G T A C G T A C G T A G T C A C G T A T G C A G T C A T C G A G T C C T G A T C A G G C T A G C A T A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CKCCGCARWW---
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A G T C A C G T A T G C A G T C A T C G A G T C C T G A T C A G G C T A G C A T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

GCM1/MA0646.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CKCCGCARWW
GTACCCGCATN-
 A C G T A C G T A G T C A C G T A T G C A G T C A T C G A G T C C T G A T C A G G C T A G C A T
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G A C G T

CEBPG/MA0838.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CKCCGCARWW
ATTGCGCAAT-
 A C G T A G T C A C G T A T G C A G T C A T C G A G T C C T G A T C A G G C T A G C A T
T C G A C A G T C A G T C T A G G A T C C T A G G A T C C T G A C G T A A G C T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CKCCGCARWW-
CTGAGTCAGCAATTT
 A C G T A C G T A C G T A C G T A G T C A C G T A T G C A G T C A T C G A G T C C T G A T C A G G C T A G C A T A C G T
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

HINFP/MA0131.2/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CKCCGCARWW
CAACGTCCGCGG--
 A C G T A C G T A C G T A C G T A G T C A C G T A T G C A G T C A T C G A G T C C T G A T C A G G C T A G C A T
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CKCCGCARWW---
GCCGCGCAGTGCGT
 A C G T A G T C A C G T A T G C A G T C A T C G A G T C C T G A T C A G G C T A G C A T A C G T A C G T A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T