Information for 6-AAGTGGTGCG (Motif 9)

G T C A C T G A A C T G A G C T A C T G A C T G C A G T A C T G A G T C C A T G
Reverse Opposite:
G T A C T C A G A G T C G T C A T G A C T G A C T C G A T A G C G A C T C A G T
p-value:1e-11
log p-value:-2.640e+01
Information Content per bp:1.684
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif6.42%
Number of Background Sequences with motif988.9
Percentage of Background Sequences with motif2.25%
Average Position of motif in Targets55.4 +/- 28.5bp
Average Position of motif in Background50.1 +/- 35.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGGTGCG
NTCAAGTGGN---
 A C G T A C G T A C G T G T C A C T G A A C T G A G C T A C T G A C T G C A G T A C T G A G T C C A T G
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGGTGCG
TTAAGTGGT---
 A C G T A C G T G T C A C T G A A C T G A G C T A C T G A C T G C A G T A C T G A G T C C A T G
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGGTGCG
TTAAGTGGN---
 A C G T A C G T G T C A C T G A A C T G A G C T A C T G A C T G C A G T A C T G A G T C C A T G
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AAGTGGTGCG
TTRAGTGSYK--
 A C G T A C G T G T C A C T G A A C T G A G C T A C T G A C T G C A G T A C T G A G T C C A T G
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGGTGCG
NTCAAGTGG----
 A C G T A C G T A C G T G T C A C T G A A C T G A G C T A C T G A C T G C A G T A C T G A G T C C A T G
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AAGTGGTGCG
--GTGGAT--
 G T C A C T G A A C T G A G C T A C T G A C T G C A G T A C T G A G T C C A T G
A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:7
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------AAGTGGTGCG-
NTNNTTAAGTGGTTANN
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T G A A C T G A G C T A C T G A C T G C A G T A C T G A G T C C A T G A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGGTGCG
CTYRAGTGSY---
 A C G T A C G T A C G T G T C A C T G A A C T G A G C T A C T G A C T G C A G T A C T G A G T C C A T G
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AAGTGGTGCG----
--GTGGCGTGACNG
 G T C A C T G A A C T G A G C T A C T G A C T G C A G T A C T G A G T C C A T G A C G T A C G T A C G T A C G T
A C G T A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGGTGCG
TTAAGTGCTT--
 A C G T A C G T G T C A C T G A A C T G A G C T A C T G A C T G C A G T A C T G A G T C C A T G
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T