Information for 8-GGCTGCCATTGTGACT (Motif 27)

A C T G A C T G G T A C A C G T A C T G G A T C A T G C C T G A A G C T A C G T A C T G A G C T C T A G C T G A A G T C A C G T
Reverse Opposite:
C G T A A C T G A G C T A G T C C T G A A G T C C G T A C T G A A G C T A T C G C T A G A G T C C G T A A C T G A G T C A G T C
p-value:1e-6
log p-value:-1.597e+01
Information Content per bp:1.908
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.4 +/- 15.3bp
Average Position of motif in Background67.7 +/- 7.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGCTGCCATTGTGACT
KGTTGCCATGGCAAC-
 A C T G A C T G G T A C A C G T A C T G G A T C A T G C C T G A A G C T A C G T A C T G A G C T C T A G C T G A A G T C A C G T
A C T G C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C A C G T

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGCTGCCATTGTGACT
CGGTTGCCATGGCAAC-
 A C G T A C T G A C T G G T A C A C G T A C T G G A T C A T G C C T G A A G C T A C G T A C T G A G C T C T A G C T G A A G T C A C G T
A G T C A T C G C T A G A G C T G A C T C T A G A G T C A G T C G C T A C A G T T C A G T C A G G A T C C T G A T C G A G A T C A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGCTGCCATTGTGACT
-GTTGCCATGGNAAC-
 A C T G A C T G G T A C A C G T A C T G G A T C A T G C C T G A A G C T A C G T A C T G A G C T C T A G C T G A A G T C A C G T
A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C A C G T

YY1/MA0095.2/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGCTGCCATTGTGACT
-GCNGCCATCTTG---
 A C T G A C T G G T A C A C G T A C T G G A T C A T G C C T G A A G C T A C G T A C T G A G C T C T A G C T G A A G T C A C G T
A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GGCTGCCATTGTGACT-
--CTTTCANTATGACTV
 A C T G A C T G G T A C A C G T A C T G G A T C A T G C C T G A A G C T A C G T A C T G A G C T C T A G C T G A A G T C A C G T A C G T
A C G T A C G T A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

RFX2/MA0600.2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGCTGCCATTGTGACT
CGTTGCCATGGCAACG
 A C T G A C T G G T A C A C G T A C T G G A T C A T G C C T G A A G C T A C G T A C T G A G C T C T A G C T G A A G T C A C G T
A T G C T C A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A G A T C T A C G

RFX5/MA0510.2/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGCTGCCATTGTGACT
CGTTGCCATGGCAACG
 A C T G A C T G G T A C A C G T A C T G G A T C A T G C C T G A A G C T A C G T A C T G A G C T C T A G C T G A A G T C A C G T
A T G C C T A G A G C T G A C T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C T G A T G C A G A T C T A C G

RFX3/MA0798.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGCTGCCATTGTGACT
CGTTGCCATGGCAACN
 A C T G A C T G G T A C A C G T A C T G G A T C A T G C C T G A A G C T A C G T A C T G A G C T C T A G C T G A A G T C A C G T
A T G C C T A G A G C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A G A T C T A C G

RFX4/MA0799.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGCTGCCATTGTGACT
CGTTGCCATGGCAACN
 A C T G A C T G G T A C A C G T A C T G G A T C A T G C C T G A A G C T A C G T A C T G A G C T C T A G C T G A A G T C A C G T
A T G C C T A G A G C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C G T A G A T C T A C G

Sox17/MA0078.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GGCTGCCATTGTGACT
----CTCATTGTC---
 A C T G A C T G G T A C A C G T A C T G G A T C A T G C C T G A A G C T A C G T A C T G A G C T C T A G C T G A A G T C A C G T
A C G T A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T