Information for 11-CTAGCTCCBTGGC (Motif 19)

A G T C A C G T C G T A C T A G A G T C C G A T A T G C A G T C A C T G A C G T A C T G A C T G A T G C
Reverse Opposite:
A T C G A G T C A G T C G T C A T A G C A C T G A T C G C G T A A C T G A G T C C G A T C G T A A C T G
p-value:1e-10
log p-value:-2.329e+01
Information Content per bp:1.846
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.6 +/- 20.1bp
Average Position of motif in Background44.9 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.55
Offset:8
Orientation:forward strand
Alignment:CTAGCTCCBTGGC-
--------TTGGCA
 A G T C A C G T C G T A C T A G A G T C C G A T A T G C A G T C A C T G A C G T A C T G A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:CTAGCTCCBTGGC---
-------NTTGGCANN
 A G T C A C G T C G T A C T A G A G T C C G A T A T G C A G T C A C T G A C G T A C T G A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CTAGCTCCBTGGC
---GCTCCG----
 A G T C A C G T C G T A C T A G A G T C C G A T A T G C A G T C A C T G A C G T A C T G A C T G A T G C
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:4
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTAGCTCCBTGGC
TTMACACCTT---
 A G T C A C G T C G T A C T A G A G T C C G A T A T G C A G T C A C T G A C G T A C T G A C T G A T G C
C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CTAGCTCCBTGGC
NGNTCTAGAACCNGV--
 A C G T A C G T A C G T A C G T A G T C A C G T C G T A C T A G A G T C C G A T A T G C A G T C A C T G A C G T A C T G A C T G A T G C
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:6
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CTAGCTCCBTGGC-
----CCGATTGGCT
 A G T C A C G T C G T A C T A G A G T C C G A T A T G C A G T C A C T G A C G T A C T G A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:CTAGCTCCBTGGC--
-------CTTGGCAA
 A G T C A C G T C G T A C T A G A G T C C G A T A T G C A G T C A C T G A C G T A C T G A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:8
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----CTAGCTCCBTGGC
CTGTCTGTCACCT----
 A C G T A C G T A C G T A C G T A G T C A C G T C G T A C T A G A G T C C G A T A T G C A G T C A C T G A C G T A C T G A C T G A T G C
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CTAGCTCCBTGGC-
CTGGCAGNCTGCCA
 A G T C A C G T C G T A C T A G A G T C C G A T A T G C A G T C A C T G A C G T A C T G A C T G A T G C A C G T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

PB0147.1_Max_2/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CTAGCTCCBTGGC--
-NNGTCGCGTGNCAC
 A G T C A C G T C G T A C T A G A G T C C G A T A T G C A G T C A C T G A C G T A C T G A C T G A T G C A C G T A C G T
A C G T G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C