Information for 4-ATTAAHSACT (Motif 6)

G C T A G C A T A C G T T C G A G C T A G C A T T A C G G T C A G A T C C G A T
Reverse Opposite:
C G T A C T A G C A G T A T G C C G T A C G A T A G C T G T C A C G T A C G A T
p-value:1e-11
log p-value:-2.535e+01
Information Content per bp:1.646
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.36%
Number of Background Sequences with motif486.8
Percentage of Background Sequences with motif1.13%
Average Position of motif in Targets54.4 +/- 23.7bp
Average Position of motif in Background50.5 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0073.1_Hoxc9/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---ATTAAHSACT---
NNAATTAATGACCNNN
A C G T A C G T A C G T G C T A G C A T A C G T T C G A G C T A G C A T T A C G G T C A G A T C C G A T A C G T A C G T A C G T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

PH0120.1_Nkx6-3/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----ATTAAHSACT---
GAAAATTAATTACTTTG
A C G T A C G T A C G T A C G T G C T A G C A T A C G T T C G A G C T A G C A T T A C G G T C A G A T C C G A T A C G T A C G T A C G T
C T A G T G C A G C A T C G T A G C T A C G A T G A C T C G T A C G T A C G A T A C G T C T G A T G A C A G C T A C G T A G C T A C T G

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----ATTAAHSACT---
GAAAATTAATTACTTCG
A C G T A C G T A C G T A C G T G C T A G C A T A C G T T C G A G C T A G C A T T A C G G T C A G A T C C G A T A C G T A C G T A C G T
C T A G T G C A G C T A C G T A C G T A C G A T A G C T C G T A C G T A C G A T A C G T C T G A G T A C G A C T A G C T A G T C A T C G

PH0047.1_Hoxa11/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ATTAAHSACT---
NNGTTTTACGACTTTA
A C G T A C G T A C G T G C T A G C A T A C G T T C G A G C T A G C A T T A C G G T C A G A T C C G A T A C G T A C G T A C G T
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

PH0172.1_Tlx2/Jaspar

Match Rank:5
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------ATTAAHSACT-
TAATTAATTAATAACTA
A C G T A C G T A C G T A C G T A C G T A C G T G C T A G C A T A C G T T C G A G C T A G C A T T A C G G T C A G A T C C G A T A C G T
A C G T G C T A C T G A C G A T G A C T C G T A C G T A G A C T G A C T C T G A C G T A G C A T C G T A C T G A G A T C C G A T C G A T

Hoxd8/MA0910.1/Jaspar

Match Rank:6
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------ATTAAHSACT-
TAAATAATTAATGGCTA
A C G T A C G T A C G T A C G T A C G T A C G T G C T A G C A T A C G T T C G A G C T A G C A T T A C G G T C A G A T C C G A T A C G T
C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A

PH0080.1_Hoxd8/Jaspar

Match Rank:7
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------ATTAAHSACT-
TAAATAATTAATGGCTA
A C G T A C G T A C G T A C G T A C G T A C G T G C T A G C A T A C G T T C G A G C T A G C A T T A C G G T C A G A T C C G A T A C G T
C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A

PH0065.1_Hoxc10/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ATTAAHSACT---
ANNTTTTACGACNTNN
A C G T A C G T A C G T G C T A G C A T A C G T T C G A G C T A G C A T T A C G G T C A G A T C C G A T A C G T A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

PH0066.1_Hoxc11/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ATTAAHSACT---
NNNTTTTACGACNTTN
A C G T A C G T A C G T G C T A G C A T A C G T T C G A G C T A G C A T T A C G G T C A G A T C C G A T A C G T A C G T A C G T
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

HOXC10/MA0905.1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATTAAHSACT
NTTTTACGAC-
A C G T G C T A G C A T A C G T T C G A G C T A G C A T T A C G G T C A G A T C C G A T
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T