Information for 5-GAGGCCAGGTGAG (Motif 4)

A T C G C G T A A C T G C T A G A G T C A G T C C G T A A C T G C T A G C G A T A C T G C G T A A T C G
Reverse Opposite:
A T G C A C G T A G T C C G T A A G T C A G T C A C G T A C T G A C T G A G T C A G T C A C G T A T G C
p-value:1e-13
log p-value:-3.015e+01
Information Content per bp:1.903
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.2 +/- 30.1bp
Average Position of motif in Background57.9 +/- 9.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1/MA0103.2/Jaspar

Match Rank:1
Score:0.73
Offset:5
Orientation:reverse strand
Alignment:GAGGCCAGGTGAG-
-----CAGGTGAGG
 A T C G C G T A A C T G C T A G A G T C A G T C C G T A A C T G C T A G C G A T A C T G C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GAGGCCAGGTGAG
---NNCAGGTGNN
 A T C G C G T A A C T G C T A G A G T C A G T C C G T A A C T G C T A G C G A T A C T G C G T A A T C G
A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

TCF4/MA0830.1/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GAGGCCAGGTGAG
---NNCAGGTGCG
 A T C G C G T A A C T G C T A G A G T C A G T C C G T A A C T G C T A G C G A T A C T G C G T A A T C G
A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GAGGCCAGGTGAG-
----VCAGGTRDRY
 A T C G C G T A A C T G C T A G A G T C A G T C C G T A A C T G C T A G C G A T A C T G C G T A A T C G A C G T
A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GAGGCCAGGTGAG
---KCCACGTGAC
 A T C G C G T A A C T G C T A G A G T C A G T C C G T A A C T G C T A G C G A T A C T G C G T A A T C G
A C G T A C G T A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C

ID4/MA0824.1/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GAGGCCAGGTGAG
---GACAGGTGTN
 A T C G C G T A A C T G C T A G A G T C A G T C C G T A A C T G C T A G C G A T A C T G C G T A A T C G
A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

USF2/MA0526.1/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GAGGCCAGGTGAG-
---GTCATGTGACC
 A T C G C G T A A C T G C T A G A G T C A G T C C G T A A C T G C T A G C G A T A C T G C G T A A T C G A C G T
A C G T A C G T A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C

TCF3/MA0522.2/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GAGGCCAGGTGAG
---NNCAGGTGTN
 A T C G C G T A A C T G C T A G A G T C A G T C C G T A A C T G C T A G C G A T A C T G C G T A A T C G
A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T

USF1/MA0093.2/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GAGGCCAGGTGAG-
---GCCACGTGACC
 A T C G C G T A A C T G C T A G A G T C A G T C C G T A A C T G C T A G C G A T A C T G C G T A A T C G A C G T
A C G T A C G T A C G T T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GAGGCCAGGTGAG---
-----CAGGTAAGTAT
 A T C G C G T A A C T G C T A G A G T C A G T C C G T A A C T G C T A G C G A T A C T G C G T A A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T