Information for 3-TGCSCMGGGCGCA (Motif 9)

G C A T A C T G A G T C A T G C A G T C G T C A A T C G A T C G A C T G T G A C A C T G A G T C C G T A
Reverse Opposite:
G C A T A C T G G T A C A C T G A G T C A T G C A T G C C A G T A C T G A T C G A C T G A G T C C G T A
p-value:1e-9
log p-value:-2.114e+01
Information Content per bp:1.809
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif14.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets34.8 +/- 28.5bp
Average Position of motif in Background44.8 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)-2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TGCSCMGGGCGCA
TGCCCTGAGGGCA
 G C A T A C T G A G T C A T G C A G T C G T C A A T C G A T C G A C T G T G A C A C T G A G T C C G T A
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TGCSCMGGGCGCA
TGCCCTGAGGGCA
 G C A T A C T G A G T C A T G C A G T C G T C A A T C G A T C G A C T G T G A C A C T G A G T C C G T A
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:3
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGCSCMGGGCGCA
TGCCCTNAGGGCA
 G C A T A C T G A G T C A T G C A G T C G T C A A T C G A T C G A C T G T G A C A C T G A G T C C G T A
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A/MA0003.3/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGCSCMGGGCGCA
NGCCTGAGGCN--
 G C A T A C T G A G T C A T G C A G T C G T C A A T C G A T C G A C T G T G A C A C T G A G T C C G T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T

MTF1/MA0863.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGCSCMGGGCGCA
TTTGCACACGGCAC-
 A C G T A C G T G C A T A C T G A G T C A T G C A G T C G T C A A T C G A T C G A C T G T G A C A C T G A G T C C G T A
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGCSCMGGGCGCA
TGCCCAGNHW---
 G C A T A C T G A G T C A T G C A G T C G T C A A T C G A T C G A C T G T G A C A C T G A G T C C G T A
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGCSCMGGGCGCA
NGCCTNAGGCN--
 G C A T A C T G A G T C A T G C A G T C G T C A A T C G A T C G A C T G T G A C A C T G A G T C C G T A
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGCSCMGGGCGCA
ATTGCCTGAGGCGAA
 A C G T A C G T G C A T A C T G A G T C A T G C A G T C G T C A A T C G A T C G A C T G T G A C A C T G A G T C C G T A
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

PB0044.1_Mtf1_1/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TGCSCMGGGCGCA
NNTTTGCACACGGCCC-
 A C G T A C G T A C G T A C G T G C A T A C T G A G T C A T G C A G T C G T C A A T C G A T C G A C T G T G A C A C T G A G T C C G T A
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGCSCMGGGCGCA
TCCCCTGGGGAC-
 G C A T A C T G A G T C A T G C A G T C G T C A A T C G A T C G A C T G T G A C A C T G A G T C C G T A
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T