Information for 1-GAGRRCACTR (Motif 8)

A C T G T C G A A T C G T C A G T C A G G T A C C T G A A G T C G C A T C T A G
Reverse Opposite:
G A T C C G T A A C T G G A C T C A T G A G T C A G T C T A G C A G C T A G T C
p-value:1e-9
log p-value:-2.126e+01
Information Content per bp:1.634
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.15%
Number of Background Sequences with motif386.3
Percentage of Background Sequences with motif0.80%
Average Position of motif in Targets54.0 +/- 26.9bp
Average Position of motif in Background47.5 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GAGRRCACTR----
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C T G T C G A A T C G T C A G T C A G G T A C C T G A A G T C G C A T C T A G A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAGRRCACTR---
-RGGGCACTAACY
 A C T G T C G A A T C G T C A G T C A G G T A C C T G A A G T C G C A T C T A G A C G T A C G T A C G T
A C G T T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAGRRCACTR-------
AATCGCACTGCATTCCG
 A C T G T C G A A T C G T C A G T C A G G T A C C T G A A G T C G C A T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

GLI2/MA0734.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GAGRRCACTR
GCGACCACACTG
 A C G T A C G T A C T G T C G A A T C G T C A G T C A G G T A C C T G A A G T C G C A T C T A G
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GAGRRCACTR--
--AASCACTCAA
 A C T G T C G A A T C G T C A G T C A G G T A C C T G A A G T C G C A T C T A G A C G T A C G T
A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAGRRCACTR
AAGGTCAC--
 A C T G T C G A A T C G T C A G T C A G G T A C C T G A A G T C G C A T C T A G
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GAGRRCACTR--
--AAGCACTTAA
 A C T G T C G A A T C G T C A G T C A G G T A C C T G A A G T C G C A T C T A G A C G T A C G T
A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

NKX2-8/MA0673.1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GAGRRCACTR---
----CCACTTGAA
 A C T G T C G A A T C G T C A G T C A G G T A C C T G A A G T C G C A T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GAGRRCACTR---
---RSCACTYRAG
 A C T G T C G A A T C G T C A G T C A G G T A C C T G A A G T C G C A T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

NKX2-3/MA0672.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GAGRRCACTR---
---ACCACTTGAA
 A C T G T C G A A T C G T C A G T C A G G T A C C T G A A G T C G C A T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A