Information for 4-CGGCTCGGTT (Motif 18)

A T G C C T A G A T C G A G T C G C A T A T G C A C T G T C A G C G A T A G C T
Reverse Opposite:
T C G A G C T A A G T C A G T C A T C G C G T A C T A G A T G C A G T C A T C G
p-value:1e-6
log p-value:-1.454e+01
Information Content per bp:1.830
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.42%
Number of Background Sequences with motif335.4
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets48.7 +/- 28.2bp
Average Position of motif in Background49.3 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CGGCTCGGTT
-GGCGCGCT-
 A T G C C T A G A T C G A G T C G C A T A T G C A C T G T C A G C G A T A G C T
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGGCTCGGTT
-NGCTN----
 A T G C C T A G A T C G A G T C G C A T A T G C A C T G T C A G C G A T A G C T
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CGGCTCGGTT
--GCTCCG--
 A T G C C T A G A T C G A G T C G C A T A T G C A C T G T C A G C G A T A G C T
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CGGCTCGGTT--
--GCTCGGSCTC
 A T G C C T A G A T C G A G T C G C A T A T G C A C T G T C A G C G A T A G C T A C G T A C G T
A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

POL001.1_MTE/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CGGCTCGGTT-----
NCGACCGCTCCGCTCGAAA
 A C G T A C G T A C G T A C G T A T G C C T A G A T C G A G T C G C A T A T G C A C T G T C A G C G A T A G C T A C G T A C G T A C G T A C G T A C G T
T C A G A T G C C T A G C G T A A T G C A G T C A C T G G A C T A C G T A T G C A T G C A C T G A G T C A C G T A G T C A C T G C T G A C T G A T C G A

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CGGCTCGGTT
--TGTCGGTT
 A T G C C T A G A T C G A G T C G C A T A T G C A C T G T C A G C G A T A G C T
A C G T A C G T C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:7
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CGGCTCGGTT--
--BRRCVGTTDN
 A T G C C T A G A T C G A G T C G C A T A T G C A C T G T C A G C G A T A G C T A C G T A C G T
A C G T A C G T A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G

PB0035.1_Irf5_1/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CGGCTCGGTT---
NTGGTTTCGGTTNNN
 A C G T A C G T A T G C C T A G A T C G A G T C G C A T A T G C A C T G T C A G C G A T A G C T A C G T A C G T A C G T
A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

PAX1/MA0779.1/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CGGCTCGGTT-------
CGTCACGCATGACTGCA
 A T G C C T A G A T C G A G T C G C A T A T G C A C T G T C A G C G A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C A T G G C A T G A T C T G C A G A T C C A T G A T G C G C T A G A C T A T C G T C G A T A G C G A C T C A T G T G A C G T C A

PB0138.1_Irf4_2/Jaspar

Match Rank:10
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---CGGCTCGGTT--
AGTATTCTCGGTTGC
 A C G T A C G T A C G T A T G C C T A G A T C G A G T C G C A T A T G C A C T G T C A G C G A T A G C T A C G T A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C