Information for 7-GCAGGTGGCGGTA (Motif 16)

A T C G A G T C C T G A A C T G A C T G G A C T C T A G A C T G G T A C A C T G A C T G A G C T C T G A
Reverse Opposite:
G A C T T C G A T A G C T G A C C A T G A G T C A G T C C G T A A G T C A G T C G A C T T C A G A T G C
p-value:1e-8
log p-value:-1.855e+01
Information Content per bp:1.755
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif2.94%
Number of Background Sequences with motif385.8
Percentage of Background Sequences with motif0.80%
Average Position of motif in Targets49.2 +/- 27.1bp
Average Position of motif in Background50.5 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGTGGCGGTA
SDGCAGGTGCNS---
 A C G T A C G T A T C G A G T C C T G A A C T G A C T G G A C T C T A G A C T G G T A C A C T G A C T G A G C T C T G A
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGTGGCGGTA
NNCAGGTGNN----
 A C G T A T C G A G T C C T G A A C T G A C T G G A C T C T A G A C T G G T A C A C T G A C T G A G C T C T G A
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGTGGCGGTA--
NNNAAGGGGGCGGGNNN
 A C G T A C G T A T C G A G T C C T G A A C T G A C T G G A C T C T A G A C T G G T A C A C T G A C T G A G C T C T G A A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

SNAI2/MA0745.1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCAGGTGGCGGTA
AACAGGTGT-----
 A C G T A T C G A G T C C T G A A C T G A C T G G A C T C T A G A C T G G T A C A C T G A C T G A G C T C T G A
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GCAGGTGGCGGTA---
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A T C G A G T C C T G A A C T G A C T G G A C T C T A G A C T G G T A C A C T G A C T G A G C T C T G A A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

TCF3/MA0522.2/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGTGGCGGTA
NNCAGGTGTN----
 A C G T A T C G A G T C C T G A A C T G A C T G G A C T C T A G A C T G G T A C A C T G A C T G A G C T C T G A
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGTGGCGGTA-
GGGNGGGGGCGGGGC
 A C G T A T C G A G T C C T G A A C T G A C T G G A C T C T A G A C T G G T A C A C T G A C T G A G C T C T G A A C G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------GCAGGTGGCGGTA
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C T G A A C T G A C T G G A C T C T A G A C T G G T A C A C T G A C T G A G C T C T G A
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

ID4/MA0824.1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGTGGCGGTA
GACAGGTGTN----
 A C G T A T C G A G T C C T G A A C T G A C T G G A C T C T A G A C T G G T A C A C T G A C T G A G C T C T G A
C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGTGGCGGTA
NNCAGGTGCG----
 A C G T A T C G A G T C C T G A A C T G A C T G G A C T C T A G A C T G G T A C A C T G A C T G A G C T C T G A
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T A C G T A C G T