Information for 1-CGGATCTTGC (Motif 4)

A G T C A C T G A C T G C G T A G A C T A G T C A C G T A C G T C T A G A G T C
Reverse Opposite:
C T A G A G T C G T C A G T C A A C T G C T G A G C A T A G T C G T A C A C T G
p-value:1e-10
log p-value:-2.526e+01
Information Content per bp:1.848
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif19.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets50.7 +/- 27.8bp
Average Position of motif in Background56.6 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)3.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ETV5/MA0765.1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGGATCTTGC
ACCGGAAGTG--
 A C G T A C G T A G T C A C T G A C T G C G T A G A C T A G T C A C G T A C G T C T A G A G T C
C T G A T A G C T G A C A C T G A C T G G C T A G C T A T C A G A G C T C T A G A C G T A C G T

SPDEF/MA0686.1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CGGATCTTGC
ACCCGGATGTA--
 A C G T A C G T A C G T A G T C A C T G A C T G C G T A G A C T A G T C A C G T A C G T C T A G A G T C
C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CGGATCTTGC
NCGCGGACGTTG-
 A C G T A C G T A C G T A G T C A C T G A C T G C G T A G A C T A G T C A C G T A C G T C T A G A G T C
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGGATCTTGC
CGGAGC----
 A G T C A C T G A C T G C G T A G A C T A G T C A C G T A C G T C T A G A G T C
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGGATCTTGC-
-TGACCTTGAV
 A G T C A C T G A C T G C G T A G A C T A G T C A C G T A C G T C T A G A G T C A C G T
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGGATCTTGC
BNTGDCCTTG-
 A C G T A G T C A C T G A C T G C G T A G A C T A G T C A C G T A C G T C T A G A G T C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CGGATCTTGC-
-TGACCTTGAN
 A G T C A C T G A C T G C G T A G A C T A G T C A C G T A C G T C T A G A G T C A C G T
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGGATCTTGC
RCCGGAARYN--
 A C G T A C G T A G T C A C T G A C T G C G T A G A C T A G T C A C G T A C G T C T A G A G T C
T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGGATCTTGC
NTGACCTTGA
 A G T C A C T G A C T G C G T A G A C T A G T C A C G T A C G T C T A G A G T C
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGGATCTTGC----
GCTGACCTTGAACTN
 A C G T A G T C A C T G A C T G C G T A G A C T A G T C A C G T A C G T C T A G A G T C A C G T A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T