p-value: | 1e-8 |
log p-value: | -1.924e+01 |
Information Content per bp: | 1.833 |
Number of Target Sequences with motif | 12.0 |
Percentage of Target Sequences with motif | 1.24% |
Number of Background Sequences with motif | 59.7 |
Percentage of Background Sequences with motif | 0.12% |
Average Position of motif in Targets | 53.9 +/- 25.4bp |
Average Position of motif in Background | 55.7 +/- 28.4bp |
Strand Bias (log2 ratio + to - strand density) | -1.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
HOXC13/MA0907.1/Jaspar
Match Rank: | 1 |
Score: | 0.67 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCTCCTTAAA- GCTCGTAAAAA |
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HOXC10/MA0905.1/Jaspar
Match Rank: | 2 |
Score: | 0.66 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CCTCCTTAAA- -GTCGTAAAAT |
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PH0048.1_Hoxa13/Jaspar
Match Rank: | 3 |
Score: | 0.66 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CCTCCTTAAA--- AAACCTCGTAAAATTT |
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POU6F2/MA0793.1/Jaspar
Match Rank: | 4 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CCTCCTTAAA AGCTCATTAT- |
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PH0068.1_Hoxc13/Jaspar
Match Rank: | 5 |
Score: | 0.65 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CCTCCTTAAA--- AAAGCTCGTAAAATTT |
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PH0151.1_Pou6f1_1/Jaspar
Match Rank: | 6 |
Score: | 0.64 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CCTCCTTAAA--- NNNACCTCATTATCNTN |
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Hoxa11/MA0911.1/Jaspar
Match Rank: | 7 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCTCCTTAAA-- GGTCGTAAAATT |
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PH0152.1_Pou6f1_2/Jaspar
Match Rank: | 8 |
Score: | 0.63 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CCTCCTTAAA--- GCAACCTCATTATNNNN |
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HOXD11/MA0908.1/Jaspar
Match Rank: | 9 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CCTCCTTAAA- -GTCGTAAAAA |
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NKX6-1/MA0674.1/Jaspar
Match Rank: | 10 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CCTCCTTAAA -GTAATTAA- |
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